Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g0454 ATGCAGCAGGATCAGCTCAAGAAGGATATTAAGGAGCTAGAGTTTTTCACTGAGTATGGGGATGCCAACAGATACAAGATTCTTGAAGTTGTTGGGAAAGGTAGCTATGGAGTTGTTTGTTCAGCAATTGATACACACACCGGGGGGAAGGTTGCAATAAAGAAGATTCATGATATTTTTGAACATATCTCTGATGCCATTAGAATCCTCCGGGAAGTCAAGTTGCTAAGACTTTTAAGACACCCTGATATTGTTGAGATTAAGCGGATCATGTTGCCCCCTTCAAAGAGGGAGTTTAAAGATATTTATGTAGTCTTTGAGCTCATGGAGTCTGATCTCCATCAGGTCATCAAAGCTAATGATGACTTGACCCGTGAACACCATCAGTTTTTTCTTTATCAGATGCTCCGTGCATTAAAATATATGCATACAGCTAATGTATATCACAGAGACCTTAAACCCAAAAATATATTGGCAAATGCAAACTGCAAACTCAAAGTTTGTGATTTTGGATTGGCAAGAGTTGCATTCAGTGATGCCCCAACAACAACTTTTTGGACGGATTATGTTGCTACAAGATGGTACAGAGCCCCAGAACTATGTGGCTCCTTCTTTTCAAAGTATACACCAGCAATTGATGTATGGAGCATTGGATGCATTTTTGCAGAGGTGTTGACAGGAAAGCCACTTTTTCCTGGTAAAAGTGTTGTGCATCAATTAGATTTGATTACCGATCTTCTTGGGACACCATCACCTGAAACTATTGCAGGAGTTCGAAATGACAAGGCAAGGAAGTACTTGATGGAAATGCGGAAGAAATCTCCTGTGCCATTTGAACGGAAATTTCCAAATGCGGATCCATTGGCACTTTGCCTACTGCAAAAGCTTTTAGCATTTGATCCAAAGGATCGGCCAACTGCTCAACAGGCACTAGCTGATCCCTTCTTTAAGGGTTTGGCCAAAGTTGAACGAGAACCGTCATGTCAGCAAATTTCAAGATTAGAATTTGAGTTTGAGAGGAGAAGAGTGACAAAAGACGATGTTAGGGAATTAATATATCGGGAAATACTGGAATATCATCCTCAATTGCTTAAAGATTACATGAATGGAACTGAAGGCACTCACTTTCTTTACCCTAGTGCAATAGATCAATTCAGAAAGCACTTTGCTTATCTTGAGGAGAATCAGGGTAAAAGTGGCCCTGTGATTCCTCCAGAAAGGAAGCATGTCTCCCTTCCAAGGTCCACTGTTCACTCTACCAAACCAGGTCGAATCGTAGGGCCAGTTCTGCACTATGACAATGGGAGAACCATAAAAGATGCTTATGACCAAAGGATGTTCTACCGAAACACGCTTCCTCAAGCCGTCTCTCCACACTGTTTCCACAGGATGCAGCAGCAACCCCCCACTAACACAAAATCTACATCAGAAACATACAAGGATATTCCACAACAAGGCAAACATCAACAACTCCCATCCCAGCAGTGTAGCATGCCAGCAAGGCCAGCCATTGATCTTAATACCAACCCATACTACCAACAGGGGAAGAGTGATCTCTTAAATGACCCTGTTGCTTCCATTGATGCAAAACTGCTGCATGCACAATCTCAATTTGGTGCAGTTGGTGCTGCAGCAGTAGCTGTTGCTACTCACAGGCATTCAGGGGGATTTCAGTATGGATTGTCATAG 1689 0.4233 MQQDQLKKDIKELEFFTEYGDANRYKILEVVGKGSYGVVCSAIDTHTGGKVAIKKIHDIFEHISDAIRILREVKLLRLLRHPDIVEIKRIMLPPSKREFKDIYVVFELMESDLHQVIKANDDLTREHHQFFLYQMLRALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDAPTTTFWTDYVATRWYRAPELCGSFFSKYTPAIDVWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPETIAGVRNDKARKYLMEMRKKSPVPFERKFPNADPLALCLLQKLLAFDPKDRPTAQQALADPFFKGLAKVEREPSCQQISRLEFEFERRRVTKDDVRELIYREILEYHPQLLKDYMNGTEGTHFLYPSAIDQFRKHFAYLEENQGKSGPVIPPERKHVSLPRSTVHSTKPGRIVGPVLHYDNGRTIKDAYDQRMFYRNTLPQAVSPHCFHRMQQQPPTNTKSTSETYKDIPQQGKHQQLPSQQCSMPARPAIDLNTNPYYQQGKSDLLNDPVASIDAKLLHAQSQFGAVGAAAVAVATHRHSGGFQYGLS 562
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g0454 562 Gene3D Transferase(Phosphotransferase) domain 1 111 339 - -
Aed1g0454 562 ProSitePatterns MAP kinase signature. 60 163 IPR003527 GO:0004707|GO:0005524|GO:0006468
Aed1g0454 562 Gene3D Phosphorylase Kinase; domain 1 40 362 - -
Aed1g0454 562 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 19 10 465 - -
Aed1g0454 562 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 10 465 - -
Aed1g0454 562 SUPERFAMILY Protein kinase-like (PK-like) 21 320 IPR011009 -
Aed1g0454 562 Pfam Protein kinase domain 25 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed1g0454 562 ProSitePatterns Protein kinases ATP-binding region signature. 31 55 IPR017441 GO:0005524
Aed1g0454 562 SMART serkin_6 25 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed1g0454 562 ProSiteProfiles Protein kinase domain profile. 25 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed1g0454 562 MobiDBLite consensus disorder prediction 464 495 - -
Aed1g0454 562 CDD STKc_TDY_MAPK 24 361 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g0454 Aed-Chr1 6309841 6315252 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g0454 1 560 MAP Kinase Gene Family AT1G53510 67.794 0.0 798
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Aed1g0454 Pkinase 1.4e-64 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g0454 - K04371 gmx:100800878 1038.87
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g0454 1 6309841 6315252 Aed1g0454 1 6309841 6315252 ECH