Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g0451 ATGCTGGATTTTTCAGTCGCGCTTCTCAACGAGACGAAGACGAAGACGAAGGCTTCGAATTTCTCTGAAACTTTTCTCTTCTCTACCAGTTCGCAAGCTAGAACAGGTAGAGTGGTTATTGATGTGAAAAGTGATAAAATCCGGCTAAAGACATGGCAGCAGGCAGCTGTAGCCGTGGGTTCGGCAGTGGGCGCATTGTTGGACCCTCGAAGAGCGGATTTGATAGCAGCTCTCGGGGAGACAACTGGAAAGCCTGCTTTTGAGAGAGTTCTTCAGAGGATGAAGAGTTCCCCTGAAGGGAGGGCCGTACTATTGGAGCGCCCTCGTGTTGTTTCTGCAAAAGTAGGACATGCTTGGGACTTGCCTGCAAATACATTTGGTGCTTCCTATGCAAGGTTTATGGGATCTAGGAACTTTTCACCAGATGATCGACCTCCTGTGCGGTTCATGGACACAGATGAACTGGCCTATGTAGCCATGCGGGCTCGTGAAGTGCATGACTTCTGGCATACCCTTTTTGACCTTCCTACTAACTTGATTGGGGAGACAGCACTGAAGGTTATTGAGTTTGAGCAGATGCAGCTTCCTATGTGTCTGCTGTCTGTTATAGGGGGCATGGCTAGATTCAGCGAAAACCAGAGAAAATTGTTTTATCAGCACTACTTCCCCTGGGCCATTCGTGCTGGCATGCAATCCACTGATCTTATGTGCATATATTATGAGCAGCATTTTCATGAAGACTTGGAAGATGTTCGCAGAAAATTGCAAATTGTTCCTGCTCCCACTACACAAGGCATGTCTGCTGTTGAGTCAGGTGAACACAACAACATCATAGGGGTACCAACTCATGGTGGACGCTACATTCAGTACAATATCTATGGCAACCTCTTTGAAGTTTCCAGAAAGTATGTCCCTCCTATTCGCCCTGTGGGTAGAGGTGCTTATGGTATTGTTTGCGCTGCTGTAAATGCGGAGACACGCGAGGAAGTTGCAATTAAGAAGGTTGGCAATGCATTTGACAACAGAATAGATGCCAAAAGGACTTTACGAGAAATTAAACTTCTTCGCCACATGGATCATGCAAATGTTATGTCCATTAAAGATATTATACGTCCTCCACAAAAGGAAAACTTCAATGATGTTTACATGGTTTCCGAGTTACTGGACACGGATCTGCATCAAATAATACGTTCCAATCAACCATTGACTGATGATCATTGTCGGTATTTTCTGTATCAATTGTTACGAGGGCTCAAATATGTACATTCAGCAAATGTTTTGCACCGTGATCTAAAGCCTAGCAATTTGCTGTTGAATGCCAATTGTGACCTTAAGATTGCAGACTTTGGTCTTGCTAGAACTACATCTGAGACTGATTTTATGACTGAGTATGTGGTCACTAGATGGTACCGAGCTCCTGAGTTGCTTCTTAATTGTTCAGAATATACAGCAGCCATTGATATATGGTCTGTTGGTTGCATACTCGGTGAAATCATAACAAGACAACCACTCTTTCCTGGCAAAGATTATGTTCATCAGCTGAGACTTATCACAGAGCTGATAGGTTCACCTGATGATGCCAGCCTTGGATTTCTACGAAGTGATAATGCTCGTAGATACGTACAACAGCTTCCCCAATATCCAAAGCAAAACTTTTCTGCTAGATTTCCCAACATGTCTCCTGGTGCGGTTGATTTGCTAGAGAAGATGCTCATCTTTGATCCAAACAGGCGTATTACAGTTGAGGAGGCGTTGAGCCACCCATACATGGCACCTCTCCATGACATCAATGAGGAACCTGTTTGCACCAGACCTTTTAGTTTTGACTTTGAGCAACCATCATTCACTGAAGAAGATATCAAGGAACTCATCTGGAGAGAATCTGTGAAGTTCAATCCTTTTCCACCAGTCTACTGA 1917 0.4418 MLDFSVALLNETKTKTKASNFSETFLFSTSSQARTGRVVIDVKSDKIRLKTWQQAAVAVGSAVGALLDPRRADLIAALGETTGKPAFERVLQRMKSSPEGRAVLLERPRVVSAKVGHAWDLPANTFGASYARFMGSRNFSPDDRPPVRFMDTDELAYVAMRAREVHDFWHTLFDLPTNLIGETALKVIEFEQMQLPMCLLSVIGGMARFSENQRKLFYQHYFPWAIRAGMQSTDLMCIYYEQHFHEDLEDVRRKLQIVPAPTTQGMSAVESGEHNNIIGVPTHGGRYIQYNIYGNLFEVSRKYVPPIRPVGRGAYGIVCAAVNAETREEVAIKKVGNAFDNRIDAKRTLREIKLLRHMDHANVMSIKDIIRPPQKENFNDVYMVSELLDTDLHQIIRSNQPLTDDHCRYFLYQLLRGLKYVHSANVLHRDLKPSNLLLNANCDLKIADFGLARTTSETDFMTEYVVTRWYRAPELLLNCSEYTAAIDIWSVGCILGEIITRQPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVQQLPQYPKQNFSARFPNMSPGAVDLLEKMLIFDPNRRITVEEALSHPYMAPLHDINEEPVCTRPFSFDFEQPSFTEEDIKELIWRESVKFNPFPPVY 638
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g0451 638 ProSiteProfiles Protein kinase domain profile. 304 590 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed1g0451 638 SUPERFAMILY Protein kinase-like (PK-like) 307 597 IPR011009 -
Aed1g0451 638 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 280 637 - -
Aed1g0451 638 CDD STKc_TEY_MAPK 297 633 - -
Aed1g0451 638 ProSitePatterns Serine/Threonine protein kinases active-site signature. 426 438 IPR008271 GO:0004672|GO:0006468
Aed1g0451 638 SMART serkin_6 304 590 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed1g0451 638 ProSitePatterns Protein kinases ATP-binding region signature. 310 334 IPR017441 GO:0005524
Aed1g0451 638 Pfam Protein kinase domain 308 590 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed1g0451 638 Gene3D Phosphorylase Kinase; domain 1 287 627 - -
Aed1g0451 638 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 280 637 - -
Aed1g0451 638 Gene3D Transferase(Phosphotransferase) domain 1 388 617 - -
Aed1g0451 638 ProSitePatterns MAP kinase signature. 339 442 IPR003527 GO:0004707|GO:0005524|GO:0006468
Aed1g0451 638 Hamap Ubiquinone biosynthesis protein <gene_name>, mitochondrial [COQ4]. 35 260 IPR027540 GO:0005743|GO:0006744
Aed1g0451 638 Pfam Coenzyme Q (ubiquinone) biosynthesis protein Coq4 46 261 IPR007715 GO:0006744
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g0451 Aed-Chr1 6283637 6292074 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g0451 271 633 MAP Kinase Gene Family AT4G01370 85.950 0.0 682
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Aed1g0451 Pkinase 4.2e-69 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g0451 K20600 - gmx:100786554 742.651