Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g0450 ATGGAAGCAGAAGGCACCGAATCGCGAAAGCAAGCGAGGCTCGCAATTATGGAACTCGCGAACATGATAAGCGTTCCCATGGCGCTCAACGCCGTCGTCCGCCTCAACGTCGCTGACGCCGTCTGGCAAGGCGGCGCCAACGCCCCCCTCTCCGCCGCCGAGATCCTCCCCCGCCTCCGCCTCGCCGGCGCCGGCGACGCCGAGAATCTCCAGCGGCTCCTCCGCATGCTCGCCAGCTACGGCGTCTTCCACGAGCACCTCGCCACCGGCCAACGGAAGTACTCCCTCACCGACGTCGGCAAAACGCTCGTCACCGATGAACAAGGCCTGTCGTACGGCCACTACGTCCTCCAACACCACCAGTACGGGTGGAGGCTTTGTTCACGGGATGCGTTGATGCGAGCATGGCCATTGGTGCATGAGGCAGTAGTGGACCCTACGAAGGAGCCCTTCGAGAGGGCCAACGGGGAGCCAGCATACGGGTACTATCTGAAGCAGCCAGAGATGAATGAGCTAATGTTAAGGGCAATGTCAGGGGTGTCAGTGCCCTTCATGAGGGCAATGCTGGAGGGCTACGATGGCTTCCAAGGTGTTGAGAAGCTGGTGGACGTGGGTGGCAGTGGCGGCGACTGCCTCCGCATGATCTTGCAGAAACACCCCACCATCAAGGAAGGGATCAACTTTGACCTACCGGAAGTTGTTGCCAAAGCCCCACAGATTCCATGTGTAACCCATGTGGGTGGTGACATGTTCAAGGCTATTCCCCAAGGAGATGCTATCTTCATGAAGTGGGTGCTAACAACATGGACTGATGAGGAATGCAAGCACATAATGCAGAACTGTCACAAGGCACTCCCTGAAGGAGGAAAACTAATAGCTTGTGAGCCAGTGCTGCCAGAGGACTCAGACGAGAGCCACAGAACGAGGGCGTTGCTTGAGGGTGACATATTTGTGATGACAATCTACAGAGCCAAAGGGAAGCACAGGACTGAAGAACAGTTCAGGCAATTAGCCACTGATGCTGGCTTCCCTCGTTTCAGAGCCTTCTATGTTGACCATTTCTACACTGCCCTTGAGTTTCAGAAATGA 1089 0.5657 MEAEGTESRKQARLAIMELANMISVPMALNAVVRLNVADAVWQGGANAPLSAAEILPRLRLAGAGDAENLQRLLRMLASYGVFHEHLATGQRKYSLTDVGKTLVTDEQGLSYGHYVLQHHQYGWRLCSRDALMRAWPLVHEAVVDPTKEPFERANGEPAYGYYLKQPEMNELMLRAMSGVSVPFMRAMLEGYDGFQGVEKLVDVGGSGGDCLRMILQKHPTIKEGINFDLPEVVAKAPQIPCVTHVGGDMFKAIPQGDAIFMKWVLTTWTDEECKHIMQNCHKALPEGGKLIACEPVLPEDSDESHRTRALLEGDIFVMTIYRAKGKHRTEEQFRQLATDAGFPRFRAFYVDHFYTALEFQK 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g0450 362 PANTHER OS02G0823400 PROTEIN 6 361 - -
Aed1g0450 362 SUPERFAMILY "Winged helix" DNA-binding domain 8 106 IPR036390 -
Aed1g0450 362 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 122 359 IPR029063 -
Aed1g0450 362 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 17 362 IPR016461 GO:0008168
Aed1g0450 362 PIRSF O-mtase 1 362 IPR016461 GO:0008168
Aed1g0450 362 Pfam O-methyltransferase domain 140 343 IPR001077 GO:0008171
Aed1g0450 362 Gene3D - 2 111 IPR036388 -
Aed1g0450 362 Gene3D Vaccinia Virus protein VP39 120 362 IPR029063 -
Aed1g0450 362 PANTHER O-METHYLTRANSFERASE 6 361 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g0450 Aed-Chr1 6278890 6282246 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g0450 1 362 Monolignol Biosynthesis Gene Families AT3G53140 73.297 0.0 559
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g0450 - - gmx:100784957 666.381