Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g0440 ATGGAAACAGCATCTGCCACAACGATTCTGGTACTGGCTCTGATAATATGTGCATGGAAGGTGGTGGAGTGGCTATGGCTGACGCCGAAGAGGCTCGAAAGGCTTCTGAGAGAGCAAGGCCTTCGAGGGAATCCGTACACGTTTCTCGTTGGGGACTCGAAGGAGATGATCCAGATGCGAAAGGAAGCTTTGTCCAAACCCATTAACCTCTTCTCTCATCACGAGATGGTGCCGCGTTTGTTTTCCTATGCTCAACACACTCTTCACAAACATGGAAAAAATTCTTTCATCTGGTTTGGAACAATACCAAGGGTGACCCTCATAGATCCTGAGCTAATCAAAGAAGTATTCAACAAGATTTGTGACTTTGGAAAGCCTAAAATGAATCCATATATCAGACTACTAGTTCCTGGTCTTTCAAGGTATGAGGGAGAAAAGTGGAGCAAGCACAGAAAGATAATCAACCCTGCATTCAATTTAGACAAGTTGAAGAATATGTTACCACTATTCATCCAATGTTGCGATGATTTGATTAGCAAATGGGAGGGAATGTTGTCTTCAGATGGATCAAGTACTGAAATGGATGTATGGCCTTTCCTTCAGAATTTGGCTAGTGATGTTATTTCTCGAACAGCATTTGGAAGTAGTTATGAAGAAGGAAGAAGAATATTTCAACTTCTACAGGAGCAAATTGAACTAACAGTGAAAATATCATTCAATGTTTACATCCCAGGATGGAGAAGGCTTAAGGAAATAGACAGAGATATAAAAGCTTCCCTTATAAATATGATTAACACGAGAGAGAAAGCACTAAAGGAGGGTGAAGCCACTAAAAACAACTTGTTAGATATGCTTCTGGAGTCAAATCACAAGGAGATTCAAGAACACAGAAACAATAAGAATGTTGGATTGAATCTTGAGGAAGTCATTGATGAATGCAAGCTATTCTACTTTGCAGGGCAGGAAACCACTTCGGTTTTGCTTGTTTGGACAATGATATTGTTGAGTAGATACCCTGATTGGCAAACACGTGCAAGGGAGGAAGTCTTGCAAGTTTTTGGCAACAGAAAACCTAGTTTTGATGGACTGAATCACCTTAAGATTAGACAGTCTTTCATATCTCTCTTTAAAAAGAAGAAGCAGAAGCAGAAGCATATTGATTCAAAGACATGGAGCATCACAGTTATGACGGTGATAGTAATACTCGTTCTGATAGGGACATGGAAGATGGTGAACACTTTATGGGTGAAGCCAAAGAGGTTCGAAAGGCTTCTAAGAGAGCAAGGTCTCCAAGGCAATCCATACAGATTTCTCGTTGGGGACACTAAGGAGTTATTCAAGATGCGAAAGGAGGCATTGTCCAAACCCATCAATCACTTCTCCAATGACATTGTGTCACGTGTTTCACCCTATGATGAGCACATGGTCAAAACATATGGCAAAGTTTCTTTTACCTGGTTTGGATCAGTACCAAGGGTGACTCTCGCAGATCCAGAGCTAATCAAAGAAGTACTCAACAAGATTGACTTTGGAAAACCTAAAATGAGTGTGCATGTCAGGTCACTAACTCCTGGTCTTGCAAGCCATGAGGGAGAAAAGTTTGTACCAACTGCTAACCATAGAAGGATGAAGGAAATTGACAGAGATATAAAAGCTTCACTTAGGGATATTGTTAACAAGAGAGAGAAAGCATTAAAGGCTGGTGAAGCCACTAAAAACAACTTGTTAGATGTGCTTCTAGTGTCAAATCAAAGGGAAATTCAAGAACACGGAAACAATAAGAAAGGTGGAATGAATCTTGAGGAAGTTATTGAGGAATGCAAGCTATTCTACTTTGCAGGGCAGGAAACCACCTCAGTTTTGCTTGTTTGGACAATGGTATTACTGAGTAGGTACCCTGATTGGCAAGCACGCGCAAGGGAGGAAGTCTTACAAGCTTTTGGCAATGGAAAACCAACTTTTGATGGACTCAATCGCCTTAAGATTCAACCTAGCTGTGTTGTGGTGTTCTTTCTCAGATTGTCCTTGTCCATTGACTACTTGCTGGTTTTCTAA 2055 0.4092 METASATTILVLALIICAWKVVEWLWLTPKRLERLLREQGLRGNPYTFLVGDSKEMIQMRKEALSKPINLFSHHEMVPRLFSYAQHTLHKHGKNSFIWFGTIPRVTLIDPELIKEVFNKICDFGKPKMNPYIRLLVPGLSRYEGEKWSKHRKIINPAFNLDKLKNMLPLFIQCCDDLISKWEGMLSSDGSSTEMDVWPFLQNLASDVISRTAFGSSYEEGRRIFQLLQEQIELTVKISFNVYIPGWRRLKEIDRDIKASLINMINTREKALKEGEATKNNLLDMLLESNHKEIQEHRNNKNVGLNLEEVIDECKLFYFAGQETTSVLLVWTMILLSRYPDWQTRAREEVLQVFGNRKPSFDGLNHLKIRQSFISLFKKKKQKQKHIDSKTWSITVMTVIVILVLIGTWKMVNTLWVKPKRFERLLREQGLQGNPYRFLVGDTKELFKMRKEALSKPINHFSNDIVSRVSPYDEHMVKTYGKVSFTWFGSVPRVTLADPELIKEVLNKIDFGKPKMSVHVRSLTPGLASHEGEKFVPTANHRRMKEIDRDIKASLRDIVNKREKALKAGEATKNNLLDVLLVSNQREIQEHGNNKKGGMNLEEVIEECKLFYFAGQETTSVLLVWTMVLLSRYPDWQARAREEVLQAFGNGKPTFDGLNRLKIQPSCVVVFFLRLSLSIDYLLVF 684
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g0440 684 PANTHER CYTOCHROME 9 368 - -
Aed1g0440 684 PANTHER CYTOCHROME 397 534 - -
Aed1g0440 684 PANTHER CYTOCHROME 531 662 - -
Aed1g0440 684 Gene3D Cytochrome P450 26 374 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed1g0440 684 Gene3D Cytochrome P450 415 533 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed1g0440 684 PANTHER CYTOCHROME P450 FAMILY MEMBER 397 534 - -
Aed1g0440 684 PANTHER CYTOCHROME P450 FAMILY MEMBER 531 662 - -
Aed1g0440 684 Gene3D Cytochrome P450 534 667 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed1g0440 684 PRINTS E-class P450 group I signature 203 221 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed1g0440 684 PRINTS E-class P450 group I signature 328 354 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed1g0440 684 PRINTS E-class P450 group I signature 88 107 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed1g0440 684 PRINTS E-class P450 group I signature 308 325 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed1g0440 684 PANTHER CYTOCHROME P450 FAMILY MEMBER 9 368 - -
Aed1g0440 684 SUPERFAMILY Cytochrome P450 466 667 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed1g0440 684 SUPERFAMILY Cytochrome P450 73 373 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed1g0440 684 Pfam Cytochrome P450 533 663 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed1g0440 684 Pfam Cytochrome P450 80 373 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g0440 Aed-Chr1 6103615 6132395 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g0440 531 662 Cytochrome P450 AT3G14610 60.902 2.71e-41 156
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g0440 - - gmx:100782998 595.504