Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g0398 ATGGTTATGGCAAATAGTAGCATCAACTTGGTGCTTCATCAGGGGTCAATGTTGCCCCATGAACTACCTATAGCTTCTCAACTGAGACCTGCAAGCTTTCATTCATTTTCTTCAACTTGGGCTATTACTAATGGAGCCCTTCATGTCTCACCACAAAGGTGGAACTGCAGTGCTTCTTGTTGTTGCTTCAGCTTCAGGGAATGCAGATGCAACTGGAAACGGCTTGTCAGAAGCTGCTCCACCAGTGAGTTTGTTATTGCCAGTGATGGCAATTATGGCAACAAGCAGGTTGTTAGTCTCACTCCCTGCCTCTACGACTATGTCCTTAAAAATGTTCGAGAGCCAGAGATTCTAAGACAACTGCGACAAGAGACTGCATCTATGTGTGGAAGTCAGATGCAGGTATCCCCTGATCAGGCACAGCTGCTTGCAATGCTTGTGCAGATTCTTGGAGCAGAACGGTGTATTGAAGTTGGTGTTTATACTGGATACTCATCACTAGCCATAGCATTAGTTCTGCCAGAATCGGGTCGTTTAGTTGCCTGTGAAAGAGATGCCAAATCTCTTGATGTTGCCAAAAAATATTATCAGCTAGCTAGTGTTTCACATAAGGTGGATGTAAAACTTGGACTTGCAATGGATTCCCTAGAATCTTTAATTCTAAATGGTGAAGCAGGAAGCTATGATTTTGCATTTATTGATGCCGAGAAAAGAATGAATGAGAAATATTTTGAACTGCTACTACAGCTGATGAGGGTTGGAGGTCTTATTGTAATTGATAATGTCCTTTGGCATGGAAAAGTTGCTGATCCACTGGTGAATACATTTTTCTGTGTTTTCCTTTATTTCCTGTTAAATGAACTTGAATTAACGTGCTATGTGCAGGTAAATGACCTTAAAACTATCAGCATTAGAAATTTTAATCAGAAGTTAATGGAAGACAAGCGTGTAAGCATCAGTATGGTAGGTACCTATTGGAGATGGAATGACAATTTGTCGAAAAAGATGATCATTTTTTAA 1020 0.4059 MVMANSSINLVLHQGSMLPHELPIASQLRPASFHSFSSTWAITNGALHVSPQRWNCSASCCCFSFRECRCNWKRLVRSCSTSEFVIASDGNYGNKQVVSLTPCLYDYVLKNVREPEILRQLRQETASMCGSQMQVSPDQAQLLAMLVQILGAERCIEVGVYTGYSSLAIALVLPESGRLVACERDAKSLDVAKKYYQLASVSHKVDVKLGLAMDSLESLILNGEAGSYDFAFIDAEKRMNEKYFELLLQLMRVGGLIVIDNVLWHGKVADPLVNTFFCVFLYFLLNELELTCYVQVNDLKTISIRNFNQKLMEDKRVSISMVGTYWRWNDNLSKKMIIF 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g0398 339 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 112 322 IPR029063 -
Aed1g0398 339 Gene3D Vaccinia Virus protein VP39 95 326 IPR029063 -
Aed1g0398 339 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 94 338 IPR002935 GO:0008171
Aed1g0398 339 PANTHER O-METHYLTRANSFERASE-RELATED 83 322 - -
Aed1g0398 339 PANTHER CATECHOL O-METHYLTRANSFERASE DOMAIN-CONTAINING PROTEIN 1 83 322 - -
Aed1g0398 339 CDD AdoMet_MTases 154 259 - -
Aed1g0398 339 Pfam O-methyltransferase 112 322 IPR002935 GO:0008171
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g0398 Aed-Chr1 5658685 5661289 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g0398 73 338 Monolignol Biosynthesis Gene Families AT3G62000 66.543 3.93e-126 363
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g0398 - - gmx:100776619 526.939