Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g0394 ATGGCTTCTTTCCAAAGCATCAACAACAACAATGAAACCCAAATTCCACAAGAGCACCTCATATCTCAAATCATGCAACTCCATGGAAGCATCTCAAAGCTAGAATCCCTAAGGCCATGCAAGCAAGTCAACACCCTCTTCACTCACTTAGTCAACCTTTGCACCCTCCCTAACAACATTGACATCTCAGCGTTGCCAAAAGAGGTGCAAGAGATGCGTGAGAGCCTCATCACCCTAAGTGGCCACGCCGAGGGACTCTTAGAGCTCGAATTCGCAACCTTCATAAGCCTCACACCCGACCCAATGAACAACATAACACTCTTCCCTTATTACGGAAACTATGTCAAACTAACAACAATCGAGAGTGAGATATTGAAACAAAACAACGTGATGGGTCCGAAAAAGGTGGCTTTTTTAGGGTCTGGTCCAATGCCACTAACTTCCATTGTCATGGCCACACACCACATGGATTACTATGATGAGTCCACACACTTTGACAACTTTGACATCGATGAGAAAGCGAACGATGTGGCGCGCAAGATCATTGCATCCGATGTGGGACTTGAGAAGAGGATGAAGTTTGAGACGAAGGATGTTATGGAAGTGAGGGAGAGGTTGGGGGAATACGATTGCGTCTTTTTGGCGGCGCTTGTGGGAATGAGTAGGGATGCGAAAGTAAAGATATTGGGACATGTGAGGAAGTATATGAAGGAGGGTGCGGTTTTGGTTGTGAGAAGTGCGAAGGGTGCAAGGGCTTTCTTGTACCCTGTTGTTGAGGAACGTGATGTGGTGGGTTTTGAGGTTCTTACCATCTTTCATCCCACGAATGATGTCATCAACTCGGTTGTTCTTCTTCGCAAGCCTAAGGCTTGA 873 0.4639 MASFQSINNNNETQIPQEHLISQIMQLHGSISKLESLRPCKQVNTLFTHLVNLCTLPNNIDISALPKEVQEMRESLITLSGHAEGLLELEFATFISLTPDPMNNITLFPYYGNYVKLTTIESEILKQNNVMGPKKVAFLGSGPMPLTSIVMATHHMDYYDESTHFDNFDIDEKANDVARKIIASDVGLEKRMKFETKDVMEVRERLGEYDCVFLAALVGMSRDAKVKILGHVRKYMKEGAVLVVRSAKGARAFLYPVVEERDVVGFEVLTIFHPTNDVINSVVLLRKPKA 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g0394 290 ProSiteProfiles Nicotianamine synthase (NAS)-like family profile. 12 290 IPR004298 GO:0030410|GO:0030418
Aed1g0394 290 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 124 246 IPR029063 -
Aed1g0394 290 PANTHER NICOTIANAMINE SYNTHASE 1 289 - -
Aed1g0394 290 CDD AdoMet_MTases 168 244 - -
Aed1g0394 290 Gene3D Vaccinia Virus protein VP39 18 289 IPR029063 -
Aed1g0394 290 Pfam Nicotianamine synthase protein 17 289 IPR004298 GO:0030410|GO:0030418
Aed1g0394 290 PANTHER NICOTIANAMINE SYNTHASE 3 1 289 IPR004298 GO:0030410|GO:0030418
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g0394 Aed-Chr1 5631911 5632783 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g0394 18 287 Nicotianamine Synthase Gene Family AT1G56430 49.817 1.20e-93 278
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g0394 K05953 - gmx:100819726 483.026