Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g0367 ATGGCTTCCGAGATGGTAAGCCCCGACACGGTGTCGAAAGCCGTCGACGCCCTCCTCAAATGGCGCCGCTCCCTATCGGAGACTCAGAAACCCAAACTCTTCGACGAGGACGAGGAATTCCTGTACCTCATCCTCACCCTGAAGAAGATTCCCGCGACATCGCGCGTTAACCCTCACAAGATCCCTCTCCCTCACTCCCTCCTCTCCGAATTCTCCGAGCAGTGCCTCATCCTCGACGACCGGCCCAACAAGGCCCGCGTCACAAAGGCCGAGGCCCAGTCAAGAATCCAGGCCGAGTCAATCCCGATCGCGAAAGTCCTCAAGCTATCGAAACTCGCCTCCGACTACCGCGCTTTCGAAGCGAAGCGAAAACTCTGCGATTCGTATGATTTGTTTTTTGCGGAGAAGAGCATTGTGCCGCTCCTGCCGCGGCTTCTCGGGAAGTCGTTTTTTAAAAAGAGGAAGATTCCGGTGCCGGTGGATCTGAAGAAGACTAACTGGAAGGAGCAGGTGGAGAGAGCGTGTTCTTCTGCTATGCTGTTTTTGCGGACCGGGACTTGTAGTGTTGTTAGGGTTGCGAAGGTCAAGATGGAGAGGGATGAGATTGTGGAGAATGTTGTTGCAGCGATTGAGGGGGCGGTCGAGGTTGTGCCGAAGAAATGGGGGAATGTGAGGTCCTTGCATTTGAAGCTGCTGGAGAGCGTCGCGCTGCCGGTGTTCCAGACGGTGCCGGATGTGAAGCTGAGGATTGAGGGAGTTAGCGTTGATGGTGAGGCAGTGACCGCGGAGAATAAGAAGAAGAGGAAGAAGGGAAAGAAGGAGAAGGATGGCGAGGTAAGTGATGCGACGGAGGATGGTGAGAGGAAGAAGAAGGGGAGGATTCATGAGGTTAGGTATATGGATGAGAATGCCATTGAGGATCAGATTGAAAAGGAATTGGCGAGCCATGGTGATGGTGGTGAAGGTGAAAAGGTGAATAAGAAAAGGAAGAAAGGGGCTTCGATTGAGTTGAGTGATGTTGAGGAATTGAAGAAGCTGGTTTTGAATGAGTTGAGTGGCAAGGGGGGGAAGAAGAAGAAGAAGGGATTGTCTGCTGGGAAGGGGGTGAAGGGAGGTTTGACTGAGGGGAGTGGAAGTGAATTGGTTGTGAACGACGAGGAGTTGGGGGTGAAGAGGAAGAAGAAGGGAGGGGATGTGAAGGCTACTAAAGGTGTGAAGGCTGCAAAAAGTGTAATAAAGGTGACGAAAGGTGTGAAGGCGCCTAAGAAAATTAAGAAGGTGGTTGCGTGA 1290 0.5248 MASEMVSPDTVSKAVDALLKWRRSLSETQKPKLFDEDEEFLYLILTLKKIPATSRVNPHKIPLPHSLLSEFSEQCLILDDRPNKARVTKAEAQSRIQAESIPIAKVLKLSKLASDYRAFEAKRKLCDSYDLFFAEKSIVPLLPRLLGKSFFKKRKIPVPVDLKKTNWKEQVERACSSAMLFLRTGTCSVVRVAKVKMERDEIVENVVAAIEGAVEVVPKKWGNVRSLHLKLLESVALPVFQTVPDVKLRIEGVSVDGEAVTAENKKKRKKGKKEKDGEVSDATEDGERKKKGRIHEVRYMDENAIEDQIEKELASHGDGGEGEKVNKKRKKGASIELSDVEELKKLVLNELSGKGGKKKKKGLSAGKGVKGGLTEGSGSELVVNDEELGVKRKKKGGDVKATKGVKAAKSVIKVTKGVKAPKKIKKVVA 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g0367 429 CDD Ribosomal_L1 11 239 IPR028364 -
Aed1g0367 429 Gene3D - 84 177 IPR016095 -
Aed1g0367 429 MobiDBLite consensus disorder prediction 259 297 - -
Aed1g0367 429 PANTHER RIBOSOMAL PROTEIN L7AE FAMILY MEMBER 4 304 - -
Aed1g0367 429 MobiDBLite consensus disorder prediction 313 332 - -
Aed1g0367 429 PANTHER RIBOSOMAL L1 DOMAIN-CONTAINING PROTEIN 1 4 304 - -
Aed1g0367 429 MobiDBLite consensus disorder prediction 353 377 - -
Aed1g0367 429 SUPERFAMILY Ribosomal protein L1 13 240 IPR023674 -
Aed1g0367 429 MobiDBLite consensus disorder prediction 273 297 - -
Aed1g0367 429 Pfam Ribosomal protein L1p/L10e family 28 235 IPR028364 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g0367 Aed-Chr1 5412695 5413984 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g0367 128 230 Cytoplasmic Ribosomal Protein Gene Family AT2G27530 31.068 1.51e-09 56.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g0367 K14775 - gmx:100782862 556.214