Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g0358 ATGAAATCTGGCAGCAGAGAGAAAGAGAAAGAAAACGATCGCAGCATCAGTTCGCATATGCAGATCCTCCATCGCCGTCTTCTCCACGCCTTAAACCTTGGCACCAGACATTTTGATGAGAAGACAAATAGATGGAAGTGGCAGTGTGCCAACATTGAAGTGCAGAAAAATGTGCTACGATCAATTGGTGCGTTTCTTGATTCATTATCAGGAGATGCGCGTGCAGCACGTCATGCTATTGTTAAGGAATCTGTTGCCGATATTTTGGGAGCATTATTATGGATTCTTCAATGCAAAAGTGAGGCCCTGTTAAGCATGGCATCAAATGTGGCAGTGAAGTTAGTTAGTGTTATACCTAGTCCATTATTGCAATCACATGTGTTGGATCTTGTTTATTGTCTGTCATCCTTGCTATCTTCGCATCAAGTAGAAGTTGCAATACCCTGCGCTACTGCTTTGAATTTGGTAATCTCAAATTTGAGTGGTACAAGTGAGAAAGCAGTTATGGAAGCATTGAAAGAAACAGAGACTTCCATTCGCATTGTTGGAAACATAAAGTATTTTGCTGAAGATACAAAAAAAATTGAATATTTTGAAGAGATGACTTTGCTTTTGAGCACAATACTCTGGCGCTGGCCTCCATCTAGATTCCCTGTCAGCAATGATGTTATACTTATGAAAGGTTTAGCAAACATCCATACAAAGACAGATAGTTCTATTAAACTTGCACTTTTAAAGCTGTACACGTCTTTAGCTTTATGTGATTCTGTAGCAAGAAAACTTATAGAGGATGGAGAAGTATTTCCACAAATGTTTGTACAGGCAATGGGAAAATCAAACCCTCATGCTGTTCGGATAGAGGGGTTTAGGCTTGCTCAATGTCTATTGAGATCCCAAGAGAATTGTTTAAAAGTGGTTGGTTTGTGTGGTGAAGCTCTTGTTGATGCAATAATTTGTGGGATGAGAGAAACTGGGCTGAGTTCTAAAAAAATTGGGAACAACCATGGATCTTTGGCAGTGGAAGCATGCCAGTTGGCTCTAATAACTCGCTGGGATGGTGATCATCATATCAATTTTTGGAAACAAGGAATTGATAGAATCCTCCTTAATCTTCTGATTGGAAATATTCAAGACCAATTGTCTAAACCTGTCTTGTCATTGGAAAAACAAATATCCATGGCAAAAGAGGGATTAAAAGCCAATTATCATCTTGGTCTTAGGAGTTATCTGTGGGATATTCTTGGGTGGCTTACAATTCATTGTGGAGAAAGTTTTAACAATTATACTCATGGAATTGAGCTCTGCATCAACTTACTAATTACATGTGCATGCTTGAGTTTTGTGGATACACTTGAAAAATGGTGCCGAATATGTCAAAAGGATATCGATGATCATTTTCAAAGTGAACCAGTATCAAGGGCTGTTCTAATGATGATTCATTCTCCATGTAATTCCATCTCCTCACATACTAGATTCTTATTATCAGATGTACTGAAGGTGAAAGGCATGCCATGCTTTAAAAGCTTAATACATACTCTAGATTATACATCATCCTTAGAAAGCTATGGATCATTTGATAAACTTCAACTTGTTATTAATTTAATTGGGTTGACTTGTCTTTCAAGTTTACCAGAGTATCAAAGATGTATCATAGATAGCAAAGGAATAAAGGTGATTGTTCTTCTTGTGAAACGATGCTTAAGTAATGACATTCATGTAGAAAGGCAAAACTTCACTCCTCATTTGCATACAACTTTCCATGAAAGGTCTTGTTGCGCTATTGATAAAGAAGATTGGGAAGGTTCAAATGTTCTCTTATTTTATAGTTTGTTGGGCTTAGCTGAAATTCTTCATCAGTGTGACCTTCTACAAGATAATCCTCGGCAATTTTCTAGAGAGGTGACAAACATTAGAGCTCAGTTAGTTAGCAAACTTCATGAGATCTGTAGTGGCAACTCTTTCAGTCCTGGAGTGAGATGGTATGTTTCTTATATTCTGACTTATTTTGAATTTTATGGTTTCCCAAATGAATTGGCCAAAAGGATTGGGAAATCTCTCAATAAGGAAGAATACTCAGATATGCAGCTTGTTGTAGCAAATGGGAATTCTGTGAGTGTTCATGGTGTTATTCTTGCTGTTCGATGTCCATCACTGCTGCCTCCTCAATTGTTACCTAGTATGAAGAGTTCTGAAGAGGTAAAAGATAAGTTTGTTGGAGAGACCAAGAGAGAAGTCCAATTATCTTCTCATGTTGATTATGAAGCATTGGTGTTGTTGTTGGAATATGTATACTTGGGATGCTTACATGCAGGAGAAGAAACGGTAAAGAAGCTGAAAATTCTTGCTAAGCGCTGCAGACTACAGCCTCTCTTGCAAATGCTTTATAGACAGCATCCAAAGTGGGGCACACCTTTCCCCAGCTCCAATCTCACTTCATCCCTTGGTTCAGCCAGAAGTTGTTTTTCGGATGTCATACTGGAAGCTAAATCAAATAAACTTGTTGGGTGGGCATGCAATATTTGTTCCTACACAGTACCCCATATGCATGTTCACAAAGTTATATTGCAGTCTGGCTGTGATTATTTACAAGGTTTGTTCCGGTCAGGAATGCAAGAAAGTCATTCACAAGTCATAAAAGTTGATATTAGCTGGGAAGCATTGATTAAACTAGTGCAGTGGTTTTATTCTGATGAGCTGCCTAATCCTCCCTCTGGATGCTCGTGGGATAATATGGATGATGAAGAAAAGCTATTTAATCTACAACCATATGTGGAGCTTTGTTGGCTTGCCGAGTTCTGGATTTTGGAAAATTTTCAGGAAGCCTGCTGGAATATGGTTATGTCTCTTCTTGATTCTTCCAGGCAGTTGGCCATTAAAATAATCAAAATGGCACATAATCTCTCTTTGTGGAAGTTGGTTGACGTTGCAGCAAATCTCATGGCTCCTTCATATCGTCAAATTCAAAATTCTGGTGAACTTGAAGGATTTGATGATGCGCTGGTGCACTTAATTTATTCTGCTTCTATTCATCTTAACCAAGAAGGCAAAAATTGCTTTAGGTGA 3063 0.3839 MKSGSREKEKENDRSISSHMQILHRRLLHALNLGTRHFDEKTNRWKWQCANIEVQKNVLRSIGAFLDSLSGDARAARHAIVKESVADILGALLWILQCKSEALLSMASNVAVKLVSVIPSPLLQSHVLDLVYCLSSLLSSHQVEVAIPCATALNLVISNLSGTSEKAVMEALKETETSIRIVGNIKYFAEDTKKIEYFEEMTLLLSTILWRWPPSRFPVSNDVILMKGLANIHTKTDSSIKLALLKLYTSLALCDSVARKLIEDGEVFPQMFVQAMGKSNPHAVRIEGFRLAQCLLRSQENCLKVVGLCGEALVDAIICGMRETGLSSKKIGNNHGSLAVEACQLALITRWDGDHHINFWKQGIDRILLNLLIGNIQDQLSKPVLSLEKQISMAKEGLKANYHLGLRSYLWDILGWLTIHCGESFNNYTHGIELCINLLITCACLSFVDTLEKWCRICQKDIDDHFQSEPVSRAVLMMIHSPCNSISSHTRFLLSDVLKVKGMPCFKSLIHTLDYTSSLESYGSFDKLQLVINLIGLTCLSSLPEYQRCIIDSKGIKVIVLLVKRCLSNDIHVERQNFTPHLHTTFHERSCCAIDKEDWEGSNVLLFYSLLGLAEILHQCDLLQDNPRQFSREVTNIRAQLVSKLHEICSGNSFSPGVRWYVSYILTYFEFYGFPNELAKRIGKSLNKEEYSDMQLVVANGNSVSVHGVILAVRCPSLLPPQLLPSMKSSEEVKDKFVGETKREVQLSSHVDYEALVLLLEYVYLGCLHAGEETVKKLKILAKRCRLQPLLQMLYRQHPKWGTPFPSSNLTSSLGSARSCFSDVILEAKSNKLVGWACNICSYTVPHMHVHKVILQSGCDYLQGLFRSGMQESHSQVIKVDISWEALIKLVQWFYSDELPNPPSGCSWDNMDDEEKLFNLQPYVELCWLAEFWILENFQEACWNMVMSLLDSSRQLAIKIIKMAHNLSLWKLVDVAANLMAPSYRQIQNSGELEGFDDALVHLIYSASIHLNQEGKNCFR 1020
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g0358 1020 PANTHER OS06G0674800 PROTEIN 5 1015 IPR044953 -
Aed1g0358 1020 SUPERFAMILY ARM repeat 52 499 IPR016024 -
Aed1g0358 1020 Gene3D Potassium Channel Kv1.1; Chain A 674 797 IPR011333 -
Aed1g0358 1020 Pfam BTB/POZ domain 847 913 IPR000210 GO:0005515
Aed1g0358 1020 Pfam BTB/POZ domain 684 792 IPR000210 GO:0005515
Aed1g0358 1020 ProSiteProfiles BTB domain profile. 692 772 IPR000210 GO:0005515
Aed1g0358 1020 Gene3D Potassium Channel Kv1.1; Chain A 815 990 IPR011333 -
Aed1g0358 1020 SUPERFAMILY POZ domain 818 946 IPR011333 -
Aed1g0358 1020 CDD BTB_POZ_ZBTB_KLHL-like 821 899 - -
Aed1g0358 1020 SUPERFAMILY POZ domain 669 793 IPR011333 -
Aed1g0358 1020 ProSiteProfiles BTB domain profile. 822 903 IPR000210 GO:0005515
Aed1g0358 1020 Gene3D - 38 332 IPR011989 -
Aed1g0358 1020 SMART BTB_4 692 802 IPR000210 GO:0005515
Aed1g0358 1020 SMART BTB_4 822 950 IPR000210 GO:0005515
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Aed1g0358 BTB 1.6e-07 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g0358 - - gsj:114385670 1848.17