Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g0342 ATGGGACCAAACTATGTCCCTGGGGAGAAAAAGGACTTGTATGTTAAAAGTGTTCAGCGCACTGTAATTTGGATGGGAAAGAAACAGGAAACTGTTGAAGACGTGCCTTGTGGCAACACAGTAGCCTTGGTGGGTTTGGACCAGTTCATCACCAAGAATGCTACATTGACAAATGAGAAGGAAGTTGATGCACACCCTATTCGAGCTATGAAGTTTTCTGTGTCACCAGTGGTAAGTGTTGCTGTTACAACCAGGGTTTCATCAGATCTTCCAAAGCTTCAGGAGGGCCTTAAACGTTTAGCAAAGTCAGACCCTATGGTGGTTTGCACACATTCAGAGACGACAGGGGAGCATATAATATCTGCTGCTGGTGAGCTTCATCTTGAAATCTGCTTGAAGGACTTGCAGGATGATTTCATGAATGGAGCAGAGGTTTCAATATCTGATCCCATTGTCTCTTTCCGTGAGACTGTGTTAGAGAGGTCTTGCCATACAGTGATGAGCAAGTCACCTAACAGACACAACCGTCTGTACATGGAGGCTGGACTTGCAGAGGCTATTGATGATGGAAAGATTTGA 579 0.4491 MGPNYVPGEKKDLYVKSVQRTVIWMGKKQETVEDVPCGNTVALVGLDQFITKNATLTNEKEVDAHPIRAMKFSVSPVVSVAVTTRVSSDLPKLQEGLKRLAKSDPMVVCTHSETTGEHIISAAGELHLEICLKDLQDDFMNGAEVSISDPIVSFRETVLERSCHTVMSKSPNRHNRLYMEAGLAEAIDDGKI 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g0342 192 Gene3D Translation factors 1 73 - -
Aed1g0342 192 CDD EF2_II 1 59 - -
Aed1g0342 192 Pfam Elongation Factor G, domain III 76 140 IPR041095 -
Aed1g0342 192 SUPERFAMILY Translation proteins 1 65 IPR009000 -
Aed1g0342 192 PANTHER TRANSLATION ELONGATION FACTOR EF-2 SUBUNIT 1 192 - -
Aed1g0342 192 SUPERFAMILY EF-G C-terminal domain-like 73 150 IPR035647 -
Aed1g0342 192 PANTHER TRANSLATION ELONGATION FACTOR-RELATED 1 192 - -
Aed1g0342 192 SUPERFAMILY Ribosomal protein S5 domain 2-like 152 191 IPR020568 -
Aed1g0342 192 Gene3D Elongation Factor G (Translational Gtpase), domain 3 74 153 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g0342 Aed-Chr1 5192743 5193321 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g0342 1 192 Eukaryotic Initiation Factors Gene Family AT1G56070 83.249 1.81e-112 338
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g0342 K03234 - gmx:100787816 326.635