Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g0326 ATGGTGAAGTTCGCAGTTGACGAACTCCGGCGGATTATGGACCGCAAGCACAACATTAGGAACATGTCTGTTATTGCTCATGTTGATCACGGAAAATCCACACTGACAGATTCTCTTGTGGCTGTTGCTGGTATCATAGCAGAAGAGAGTGCAGGAGATGTGAGGCTGACAGATACCCGTCAAGATGAAGCTGAGCGTGGAATCACTATCAAGTCCACCGGCATCTCTCTCTACTATGAGATGCAAGAGAATGACTTGAAGAATTTCAAGGGAGAGCGTGAAGGGAATGAGTTCCTTATAAACCTCATTGACTCGCCGGGGCATGTGGACTTCTCATCCGAGGTCACTGCTGGGCTCCGCATCACCGATGGATGCTTCCAAATTATCGAACTTTGCATGAGGAACCAAAGGGATGTGCTGTGGCCGAGGTTGGAAAAGCTTGGGGTGAACTTGAAGTCAGAGGAAAAGGAGTTGACAGGAAAGGCTTTGATGAAGCGTGTTATGCAGAGCTGGCTTCCAGCAAGTAGAGCACTTCTGGAAATGATGATATATCACCTTCCCTCTCCGTCCAGCGCACAGCAATATCGTGTGGAGAATTTTTATGAGGGTCCCCTTGATGATCAATATGCTGCTGCTATCAGAAACTGTGATCATGAAGGTCCTCTGATGCTCTATGTCTCAAAGATGATTCCAGCATCTGATAAGGGGAGATTTTTTGCTTTTGGTCGTGTATTCTCTGGCAAGGTTTCAACTGGTTTGAAGGTCAGAATCATGGGACCAAACTATGTCCCTGGGGAGAAAAGGGACTTGTATGTTAAAAGTGTTCAGCACACTGTAATTTGGATGGGAAAGAAACCGGAAACTGTTGAGGATGTGCCTTGTGGCAACACGGTAGCCTTGGTGGGTTTGGACCAGTTCATCACCAAGAATGCTACAATGACGAATGAGAAGGAATTTGATGCACACCCTATTCGAGCTATGAAGTTTTCTGTGTCACCAGTGATAAGTGTTGCTGTTACGACCAGGGTTTCATCAGATCTTCCAAAGCTTCAGGAGGGCCTTAAACGTTTAGCAAAGTCAGACCCTATGGTGGTTTGCACACATTCAGAGACGACAGGGGAGCATATAATATCTGCTGCTGGTGAGCTTCATCTTGAAATCTGCTTGAAGGACTTGCAGGATGATTTCATGAATGGAGCAGAGGTTTCAATATCTGATCCCATTGTCTCTTTCCGTGAGACTGTGTTAGAGAGGTCTTGCCGTACAGTGATGAGCAAGTTACCTAACAGACACAACCGTCTGTACATGGAAGCAAGGCCCATGGAGGCTGGACTTGCAGAGGCTATTGATGATGGAAAGATTCAACCCGGGGTTGACCCCCAAAAAAGGTCTCAAATATTGCCAGAAGGGTTTGGTTGGGACAAGGATCTGGCCAAGAAAATATGGTGTTTTGGCCCCGATGGTAAAGGACCCAACATGGTGGTAGATACCTGCAGGGGCATACAGTACCTCAATGAAATCAAAGACTCGGTTGTTACTGGGTTTGAGGGAGCATCTTATGCAGGTCCAATGGCTGATGAGAACATGAGAGGGGTCTGCTTTGAGATTTGTGATGTGGTTCTTCATGCTGATGCCATTCATAGAGGAGTTGGCCAGATCATTTCAACTGCAAGAAGAGCCTGTTATGCAGCCATGCTGACAGCAAAACCGAGACTTCTCGAGCCTGTCTATCTAGTGGAAATACAGGCACTTGAACAGGCTCTTGGTGGGATATACAGTGCTCTTAACCAGAAAAGAGGGCATGTGTTTGAGGAAATCCAGAGGCCTGGCTCCCCACTTTACAATGTCAAGGCATATTTGCCTGTTGTTGAGTCATTTAAATTCAATGAATCACTAAGGGCTCAAACTGGGGGACAGGCTTTTCCCCAGTTAGTATTTGACCATTGGGATATAGTGCCATCTGATCCACTAGAACCAGGCATCTATCTGCGATTTGATACACAGCAAGTCAACAACACTACAACAGATATGTTGGAAACCCTGCCGCATACCTATTCTGTACAAGGTAACTCTGACTTGGAAATTGCCAAAACTTCATTAAATCTGCATGCAATCAGGCACATAGTACTATTCAACTCTCCACTGGATCAGGCCAACAGCTAG 2163 0.4614 MVKFAVDELRRIMDRKHNIRNMSVIAHVDHGKSTLTDSLVAVAGIIAEESAGDVRLTDTRQDEAERGITIKSTGISLYYEMQENDLKNFKGEREGNEFLINLIDSPGHVDFSSEVTAGLRITDGCFQIIELCMRNQRDVLWPRLEKLGVNLKSEEKELTGKALMKRVMQSWLPASRALLEMMIYHLPSPSSAQQYRVENFYEGPLDDQYAAAIRNCDHEGPLMLYVSKMIPASDKGRFFAFGRVFSGKVSTGLKVRIMGPNYVPGEKRDLYVKSVQHTVIWMGKKPETVEDVPCGNTVALVGLDQFITKNATMTNEKEFDAHPIRAMKFSVSPVISVAVTTRVSSDLPKLQEGLKRLAKSDPMVVCTHSETTGEHIISAAGELHLEICLKDLQDDFMNGAEVSISDPIVSFRETVLERSCRTVMSKLPNRHNRLYMEARPMEAGLAEAIDDGKIQPGVDPQKRSQILPEGFGWDKDLAKKIWCFGPDGKGPNMVVDTCRGIQYLNEIKDSVVTGFEGASYAGPMADENMRGVCFEICDVVLHADAIHRGVGQIISTARRACYAAMLTAKPRLLEPVYLVEIQALEQALGGIYSALNQKRGHVFEEIQRPGSPLYNVKAYLPVVESFKFNESLRAQTGGQAFPQLVFDHWDIVPSDPLEPGIYLRFDTQQVNNTTTDMLETLPHTYSVQGNSDLEIAKTSLNLHAIRHIVLFNSPLDQANS 720
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g0326 720 PANTHER TRANSLATION ELONGATION FACTOR-RELATED 127 661 - -
Aed1g0326 720 Gene3D - 417 566 IPR014721 -
Aed1g0326 720 CDD EF2_II 221 316 - -
Aed1g0326 720 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 17 124 IPR000795 GO:0003924|GO:0005525
Aed1g0326 720 SUPERFAMILY EF-G C-terminal domain-like 574 660 IPR035647 -
Aed1g0326 720 PANTHER TRANSLATION ELONGATION FACTOR EF-2 SUBUNIT 1 125 - -
Aed1g0326 720 SUPERFAMILY Translation proteins 189 322 IPR009000 -
Aed1g0326 720 Gene3D - 567 676 - -
Aed1g0326 720 SMART EFG_IV_2 452 569 IPR005517 GO:0005525
Aed1g0326 720 Pfam Elongation Factor G, domain III 333 397 IPR041095 -
Aed1g0326 720 PANTHER TRANSLATION ELONGATION FACTOR-RELATED 1 125 - -
Aed1g0326 720 Gene3D Translation factors 189 330 - -
Aed1g0326 720 PRINTS GTP-binding elongation factor signature 21 34 IPR000795 GO:0003924|GO:0005525
Aed1g0326 720 PRINTS GTP-binding elongation factor signature 101 111 IPR000795 GO:0003924|GO:0005525
Aed1g0326 720 PRINTS GTP-binding elongation factor signature 65 73 IPR000795 GO:0003924|GO:0005525
Aed1g0326 720 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 4 187 IPR027417 -
Aed1g0326 720 Gene3D Elongation Factor G (Translational Gtpase), domain 3 331 410 - -
Aed1g0326 720 Pfam Elongation factor Tu GTP binding domain 17 130 IPR000795 GO:0003924|GO:0005525
Aed1g0326 720 Gene3D - 3 132 IPR027417 -
Aed1g0326 720 SUPERFAMILY Ribosomal protein S5 domain 2-like 409 573 IPR020568 -
Aed1g0326 720 CDD eEF2_snRNP_like_C 574 653 - -
Aed1g0326 720 Pfam Elongation factor G, domain IV 460 569 IPR005517 GO:0005525
Aed1g0326 720 ProSitePatterns Translational (tr)-type guanine nucleotide-binding (G) domain signature. 58 73 IPR031157 -
Aed1g0326 720 PANTHER TRANSLATION ELONGATION FACTOR EF-2 SUBUNIT 127 661 - -
Aed1g0326 720 CDD aeEF2_snRNP_like_IV 406 578 - -
Aed1g0326 720 Pfam Elongation factor Tu domain 2 240 308 IPR004161 GO:0005525
Aed1g0326 720 CDD EF2_snRNP_III 333 406 - -
Aed1g0326 720 SUPERFAMILY EF-G C-terminal domain-like 330 407 IPR035647 -
Aed1g0326 720 Pfam Elongation factor G C-terminus 571 657 IPR000640 -
Aed1g0326 720 SMART EFG_C_a 571 660 IPR000640 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g0326 Aed-Chr1 5056569 5063541 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g0326 127 660 Eukaryotic Initiation Factors Gene Family AT1G56070 79.026 0.0 905
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g0326 K03234 - cit:102616841 893.264