Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g0324 ATGTCGAGAACTGTTTTGATCAGTGGCCATTACTCGGTTGTTTCAACTTTCAATGAAGCAATGGCGATGGGAATTGCAGTGTTCTTCTGCACGCCTCCTCTTGAATTGGAAATTAATCAAATGGATAGTGACATGAGAGATTTTACTTGGGCAGTTGACAATGCGATAAGGAGTGAAACTGCGTCAAGTTTGGGAGAACCCCATGTCCGTAGTTTTGATTCGGTAGTGAACCGTGCCATAAGGAGTAGCACTACTGAGTCGAATTTGGGAGCATCCCGCCGCAGTGGCCGTAGTTTTGCTCCGGTGGTATCATGGAATCGGACAGGAACAGAACATGTTTCTGCTGCACGAGTATTCCACCCGGCTGAGCTTAAAGCGGCCACCAACAACTTCTCATCTAAGAACAAGATTGGCACCGGAAACTTTTCTGTTGTGTACGTTGGCACACTCGTTAATGGTAGTGAGGTGGCAATCAAGAGAGGTGAAGGAATCTGGTTCAATCTTTGCTCATTTAATTCTAATTTGGCCTTCTTGTCCCGCCTACACCACAAGAACTTGGTCGGACTCGTGGGGTTCTGTAAAGAGAGAGATAATAGGCCGAAATATAAGATGGGACTCTTGGTGTATGAGTACATGGAGAATGGGTCGTTGTATTATCATTTGCATGTCGACAAGGGTAGCATTAGCAAGTTGAATTATTGGAAAATGAGGATACAGATTGCTTTGGATGTTGCCCAGGGAATAGAATATCTTCACAACTATGCACCTCCCTCTAATATTCACAGACATACCATCAAGTCTTCCAATATTCTTTTTGATGACACTTGGACGGCAAAACTATCTGATTTTCAGATGAGTTCAGAACCAAACACTCATTATCCTTCCACAAAGAAGGGAAGCTTTTGGGGAACAAAATCATCCTTTGGATACTTATACTCGAATCCTGAGTACTTTCGTCTAAATGCGGTGACAACAAAGAGTGACGTATATGAGTTTGGAGTTGTACTTCTTGAACTTTTAACGGGAAAGACAGCTGTATTCCAGTCTATGGAAGATATAGGAATAGGAATCCCACTAGTGTCCTTCGCAGTGCCTGCTATTTTGGCCGGAGAATTGCTGAAAATTTTGGATCCAAGGGTTGGACTGCCCAATGTGGATGAAACATATGCACTGCAGTTAGTGGCCCTAATAGCTATCCGTTGTGTGAATTTAAATGAGAAAGATCGACCAACCATGACTGAGAATGTGGTCATTTTGGACCAGGCTTTGGATATTTGTGATAGTATCTCTTATGATATCAATTCTAGCTGA 1311 0.4287 MSRTVLISGHYSVVSTFNEAMAMGIAVFFCTPPLELEINQMDSDMRDFTWAVDNAIRSETASSLGEPHVRSFDSVVNRAIRSSTTESNLGASRRSGRSFAPVVSWNRTGTEHVSAARVFHPAELKAATNNFSSKNKIGTGNFSVVYVGTLVNGSEVAIKRGEGIWFNLCSFNSNLAFLSRLHHKNLVGLVGFCKERDNRPKYKMGLLVYEYMENGSLYYHLHVDKGSISKLNYWKMRIQIALDVAQGIEYLHNYAPPSNIHRHTIKSSNILFDDTWTAKLSDFQMSSEPNTHYPSTKKGSFWGTKSSFGYLYSNPEYFRLNAVTTKSDVYEFGVVLLELLTGKTAVFQSMEDIGIGIPLVSFAVPAILAGELLKILDPRVGLPNVDETYALQLVALIAIRCVNLNEKDRPTMTENVVILDQALDICDSISYDINSS 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g0324 436 Pfam Protein tyrosine and serine/threonine kinase 133 414 IPR001245 GO:0004672|GO:0006468
Aed1g0324 436 Gene3D Phosphorylase Kinase; domain 1 103 211 - -
Aed1g0324 436 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN CCR4 111 430 IPR044815 GO:0004674
Aed1g0324 436 ProSiteProfiles Protein kinase domain profile. 131 423 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed1g0324 436 ProSitePatterns Protein kinases ATP-binding region signature. 137 159 IPR017441 GO:0005524
Aed1g0324 436 Gene3D Transferase(Phosphotransferase) domain 1 212 430 - -
Aed1g0324 436 SUPERFAMILY Protein kinase-like (PK-like) 112 415 IPR011009 -
Aed1g0324 436 PANTHER SERINE/THREONINE-KINASE CCR4-LIKE PROTEIN 111 430 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g0324 Aed-Chr1 5041921 5043337 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g0324 107 426 Receptor kinase-like Gene Family AT3G55950 51.170 3.14e-87 281
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Aed1g0324 PK_Tyr_Ser-Thr 1.5e-30 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g0324 - - gmx:100804497 346.665