Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g0316 ATGGCGGCGCCGAACAGGATCGAGCGCGCTCACCAGATGTACCGTGACGGACGTTACGAGGAGGCGCTAGGGTTCTACACGGAGGCAATCGCCGTGGCCAAGACCAATCCTCAGAAGATCGCTTTGCATAGCAACAGAGCCGCGTGCTATCTCAAGCTTCACGATTTCAAAAAGGCAGCAGAAGAGTGTACTTCAGTGCTTGAGCTTGATCACAAGCACAGTGGGGCATTGATGCTGCGGGCTCAAACGCTGGTCACCCTGAAGGAGTACCATTCAGCACTTTTTGATGTCAACAGACTCTTAGAGTTGAATCCATCTTCAGAGGTTTATCAAAATCTTCAAGCTCGCTTGAAGACGCAGTTGTCACTTGCTCCAATACCAGAATCAGAAGAGGAGTTTGAAGAACAGGAAGATGAGGAGCCTGAAGTGATACCACAAGTGGAGAGCCAAAAAGAAGAAATGGGACAGAAATATTCATCGATTTCTAATATTAGGACAGATAAAAAGGATGAGCTTGACAAAGGTATTATTATGGCTGAATGCACTCCCCATGAAACTGAGCCCAAGTTTTCATCCAAGCAAGGGAGAAACCAAAACCATGAGCCGAAGAAGTCCACAGCAGATGCCATAGCTCCTAAATCACCAAACAAGGAATCACCAGAGCAAGATTCAAAAGGATGGCAAACAATTCCAAAACCAAAAGGACATTCAGCTCTAGACTACGCAAGGTGGGACAGTGTTGAAGATGATTCCAGTGATGATGATGACGACGACAACGATGAAGATGAAGAATCTTTGCCTCAGTACCGATTTCGTGTCAGAACAATTGGTGTCCGTCCTGTAAAGTGA 849 0.4641 MAAPNRIERAHQMYRDGRYEEALGFYTEAIAVAKTNPQKIALHSNRAACYLKLHDFKKAAEECTSVLELDHKHSGALMLRAQTLVTLKEYHSALFDVNRLLELNPSSEVYQNLQARLKTQLSLAPIPESEEEFEEQEDEEPEVIPQVESQKEEMGQKYSSISNIRTDKKDELDKGIIMAECTPHETEPKFSSKQGRNQNHEPKKSTADAIAPKSPNKESPEQDSKGWQTIPKPKGHSALDYARWDSVEDDSSDDDDDDNDEDEESLPQYRFRVRTIGVRPVK 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g0316 282 SUPERFAMILY TPR-like 7 121 IPR011990 GO:0005515
Aed1g0316 282 MobiDBLite consensus disorder prediction 247 264 - -
Aed1g0316 282 SMART tpr_5 74 107 IPR019734 GO:0005515
Aed1g0316 282 SMART tpr_5 40 73 IPR019734 GO:0005515
Aed1g0316 282 SMART tpr_5 3 36 IPR019734 GO:0005515
Aed1g0316 282 MobiDBLite consensus disorder prediction 128 143 - -
Aed1g0316 282 MobiDBLite consensus disorder prediction 163 207 - -
Aed1g0316 282 MobiDBLite consensus disorder prediction 127 282 - -
Aed1g0316 282 Gene3D Tetratricopeptide repeat domain 2 152 IPR011990 GO:0005515
Aed1g0316 282 PANTHER TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN 2 282 - -
Aed1g0316 282 Pfam Anaphase-promoting complex, cyclosome, subunit 3 17 94 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g0316 2 121 Calmodulin-binding Proteins AT3G25230 32.576 3.10e-13 67.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g0316 - - gmx:100792046 467.618