Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g0302 ATGGCTTCGACCCTTTTCACAAAGATGCGTTTGGGTCATCGATTGATCCACTCTTCTTCGCTCCTCACTCACCAGCCACAGATTCTCTCTTCTTTATTCAGTAAACGGCTGTTTTGCATACGAACTGTCCTGGGCTCAGCCTATACATCCCAAAACATCAAAACAACTGGTTGGACTCCTTGCATGGCTTCTTCCTCAGTTGGTAGAAGAGCTACATATTCAACACAATCTGTATCAACAAATGAGCCAGTTGTTTCTGTAGATTGGCTTTATGCTAACCTGAAGGTGCCAGATATCAAGGTACTGGATGCTTCGTGGTACATGCCGGATGAGCAGAGGAATCCAATTCAAGAATATCAGGTTGCTCACATTCCTGGTGCCCTTTTCTTTGACGTAGATGGAATAGCTGATCGGACTACAAAATTACCACACATGCTGCCATCAGAGGAAGCTTTTGCTGCTGCTGTTTCTGCTCTTGGCATAGAGAACAAAGATGATTTGGTTGTTTATGATGGAAAAGGGTTATTTAGTGCAGCTCGTGTTTGGTGGATGTTCCGAGTATTTGGGCATGACAGAATTTGGGTATTAGATGGTGGCCTGCCAAGGTGGCGTGCCTCAGGTTATGATGTTGAATCTAGTGCTTCGAGTGATGCTATTCTTAAAGCCAGTGCTGCTAGTGAGGCTATAGAGAAAGTATATAAGGGACAAACAGTTGGCCCACTCACATTTCAGACTAAATTTCAGCCACACCTTGTTTGGAACATTGATGAGGTAAAGAAAAATATAGAGGACAAAACTCACCAACACATAGATGCTCGATCAAAGCCTAGGTTTGATGGAGCTGTACAAGAGCCTCGAAAGGGAATCAGAAGTGGTCATGTACCTGGTAGCAAATGCATCCCTTTTGCTCAGTTGTTAGATAGTAGTTCACACACATTGTTACCAGCAGATGAGCTGAAGAAGCAATTTGAACAAGAAGGCATCTCTCTGGAAACCCCAGCTGTGACTTCATGTGGAACGGGCGTAACTGCTTGCATTCTTGCATTGGGTCTTCATCGTCTTGGAAAGACTGATGTTGCAGTTTATGATGGATCTTGGACTGAATGGGGAGCAAAATCTGATACACCTGTTGACACTTCATGA 1143 0.4401 MASTLFTKMRLGHRLIHSSSLLTHQPQILSSLFSKRLFCIRTVLGSAYTSQNIKTTGWTPCMASSSVGRRATYSTQSVSTNEPVVSVDWLYANLKVPDIKVLDASWYMPDEQRNPIQEYQVAHIPGALFFDVDGIADRTTKLPHMLPSEEAFAAAVSALGIENKDDLVVYDGKGLFSAARVWWMFRVFGHDRIWVLDGGLPRWRASGYDVESSASSDAILKASAASEAIEKVYKGQTVGPLTFQTKFQPHLVWNIDEVKKNIEDKTHQHIDARSKPRFDGAVQEPRKGIRSGHVPGSKCIPFAQLLDSSSHTLLPADELKKQFEQEGISLETPAVTSCGTGVTACILALGLHRLGKTDVAVYDGSWTEWGAKSDTPVDTS 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g0302 380 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 256 379 IPR036873 -
Aed1g0302 380 ProSitePatterns Rhodanese signature 1. 119 130 IPR001307 GO:0004792
Aed1g0302 380 PANTHER THIOSULFATE/3-MERCAPTOPYRUVATE SULFURTRANSFERASE 1, MITOCHONDRIAL-LIKE 65 380 - -
Aed1g0302 380 Gene3D - 249 377 IPR036873 -
Aed1g0302 380 ProSiteProfiles Rhodanese domain profile. 263 378 IPR001763 -
Aed1g0302 380 Gene3D - 76 219 IPR036873 -
Aed1g0302 380 CDD TST_Repeat_1 84 207 - -
Aed1g0302 380 ProSiteProfiles Rhodanese domain profile. 95 212 IPR001763 -
Aed1g0302 380 CDD TST_Repeat_2 254 371 - -
Aed1g0302 380 ProSitePatterns Rhodanese C-terminal signature. 359 369 IPR001307 GO:0004792
Aed1g0302 380 Pfam Rhodanese-like domain 256 371 IPR001763 -
Aed1g0302 380 Pfam Rhodanese-like domain 86 205 IPR001763 -
Aed1g0302 380 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 82 214 IPR036873 -
Aed1g0302 380 PANTHER THIOSULFATE SULFERTANSFERASE 65 380 IPR045078 GO:0016783
Aed1g0302 380 SMART rhod_4 253 375 IPR001763 -
Aed1g0302 380 SMART rhod_4 85 209 IPR001763 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g0302 62 379 Sulfurtransferasese or Rhodanese AT1G79230 77.673 0.0 537
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g0302 K01011 - gmx:100798053 724.161