Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g0293 ATGAAAGAACGATACACCATACCAGCAGGCTGGGGAATCATGGTGTGTCCCCCTGCTGTACACTTGAACCCAACCAAATATGAGGATCCTCTTGCCTTCAACCCATGGAGATGGGAGGGAATGGAAATGAATGCTACAAGCAAATATTTCATGGCTTTCGGTGGAGGCGTGAGATTTTGTGTTGGGGCAGACTTTGCTAGGATGGCTTTTACGTCCAGATTACAGAGAAAGGACCGATGGAAAGTATGA 249 0.4699 MKERYTIPAGWGIMVCPPAVHLNPTKYEDPLAFNPWRWEGMEMNATSKYFMAFGGGVRFCVGADFARMAFTSRLQRKDRWKV 82
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g0293 82 PANTHER CYTOCHROME P450 26 4 81 - -
Aed1g0293 82 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 53 62 IPR017972 GO:0005506|GO:0016705
Aed1g0293 82 Gene3D Cytochrome P450 2 74 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed1g0293 82 PRINTS E-class P450 group IV signature 5 19 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed1g0293 82 PRINTS E-class P450 group IV signature 21 39 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed1g0293 82 PRINTS E-class P450 group IV signature 44 60 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed1g0293 82 Pfam Cytochrome P450 5 69 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed1g0293 82 SUPERFAMILY Cytochrome P450 5 70 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed1g0293 82 PANTHER CYTOCHROME P450, FAMILY 87, SUBFAMILY A, POLYPEPTIDE 2 4 81 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g0293 Aed-Chr1 4647435 4648413 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g0293 5 81 Cytochrome P450 AT1G12740 63.750 2.57e-32 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g0293 - - ming:122086764 129.798