Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g0287 ATGGAACAATCAAGATTCCAAAACGCTGTTTTATACAACATGGATCCTAGACATGATGAATACCACCCACCAGGGCCACAGTCAGTGATGCAGGACCATCTGGAGGGCACACATGCCAGTAGAAGACCAGCTGACCTCAATACATCAGAAGTTAAACCTGTACATAATTACTCCATACGGACAGGTGAGGAATTTGCTCTTGAATTTATGAGAGATAGGGTGAATATCACGAAGCCTGTATCAAATGTCAGCGACTCCAATTATACCCCAGGTTACATGGAACTGAAAGGCATTTTAGGCATCAGTCATCCAGGATCTGAAAGTGGATCTGATATTTCTATGCTCTCAATGGTTGACAAATATCCAAAAGAATTTGATAGAATGAATACATCAATACCTGGAGACAGAAGCAACTACGGGTCGATTCAATCAATGCCAAGAACTTCATTGAATCAGGACAATAGACAATTTGTGCCTGGGTATGGGTCTTTTGGAGTTTATGATAGATCAATGATGATGAAGTTTCTTTGCAGCTTTGGTGGTAGAATATTGCCACGACCATGTGATGGAAAGCTAAGGTATGTTGGAGGCCAAACACGCATTCTTCGTATAAGAAAGGACATATCTTGGCAGGAGCTCATGCAGAAAGCATTTCAAATCTATAATCAGGTTCATGCAATCAAGTATCAGCTTCCTGGGGAAGATCTTGATGCTTTGGTGTCTGTGTCATCTGATGAGGATTTGCAGAATATGATGGAGGAGTGTAATCATCTACTAGATAGAGAAGGATCACAAAAGCTTAGGATGTTTTTGTTCTCATTGAGTGATTTGGAGGATGCTCAGTTTGGTATCAGCAGCATTGGTGATGATTCTGAGATCCAGTATGTTGTTGCTGTTAATGGCATGGACTTGGAATCAAGAAAAAGCACAACCATGTTTGGTATCAGTTTTTCTGCAAATGATATAAATGAATTGGACAGGCAAAGTATTGGCAGGGACACTAGTAGAGTTGGTGTAGAATCTATTGCACAAGGTGCTCCCCTGACTAACAATTTTGACTCATCATTGGCTACTCAGTCCTCACAACCAGTGCTACCAACTTCCTCAAATTCTTATGACGCGTATCCACAGTTTTATGGTGATCAAATGATGCGCCTTGGGGAACCTAGTGATCAATATATTATTAATCATGGCCTTAATCCTTCTCATAAACCTGTTATTGGAGAGACTCCTATCATTATGCCTCATATGCTCATTAATCCACCAGGAATTTTTAGTGAAGGCCTTCCACCTCGTGGGATACAAGTACAAAATTCAGAAATACCAGGAACATTGGCGAACAAGATGGTTGATAGTTCAATTCAACATGGAAGTGACCCTGGAAAAGTTTTAGCCTCAGAATTACCAACACCAGCTCCTGTACAACTGCTTAATAACGGTTACATGAAAAATAATTTTCCTGAAGCATCAGTTGTTGTTACTGCACCAGAGGGGCATTCGTTGCATCCGACAAAGATGGACAGGCTCCCGGATTATGAAGAGACTTATTCTACATCTAGCAGTGCATTTGGCCCTGCTTATGTTGATTCCCAGTCCAATGCCTCTGACTTGAGTTCTCTTCATCCTCCTCCTCTTCCTAAAAGAGTTTACTATTCGGAGAGAATTCCACGGGAACAATTGGAGTTGCTGAATCGGTCCTCGAAATCGGATGATACACACAGTTCTCAGTTGCATGTTTCAGATTTACTTTCTGATGTCAACCCACCAGATTCAGCTGCAGAGTCTAGTGACAAGTTGCATGATGGAAATCTGCCTAATCTATCTGAGGAATTTGGTGTCGCAGAAAAGCCCTTGCATGCAGATGGCTATGCTGTTGATAACGGGGCTGTCAATCATCAAATATACAAACAGCTGCCTGATGCAAGCAGTCAGATGAAATCAAAGCTAACTGAGCATGTGAATCCCGAGTTGATGCAGGTATTATCGGACAATGGAGGACGCAAAGATTTGTTAAATAAGGATAATGTTGTTGGGTTGGAAACAGAAATTTATAGTAAAAATAACTATAACAAACCCCTGGTTGATGAGACAAAAGCTAGTAAACCAGACTTGCCTAATTTGCACCAGGTTTCTTCTGATAAGCACCTTGAATTTGATGATCCAGCATCCATTCTTCCAGAAGTTGATTGGGGTGATACCTCTGTGAAGGAGTCTAATGAGGATATTAATGTTCAGGCCTTACCTGTTTCCATAAATGGGAATACAACTACAGAAGATGATTCTAAAGAATTTCCTTCAAATGTTGTTTCTGAACAAGTGCAAGGTGACATCCTTATTGATATTAATGATCGGTTCCCCCGTGAATTTTTCACTGATATGTTCTCTAAAGCAGTACTTGAAGAAGACCCCTCTAGTCTGCATCCATTAACCTCAGATGGAGTGGGCTTAAGTGTAAACATAGAAAATCATGAACCTAAGCGATGGTCATATTTTCAAAAATTGGCTCAAGAAGGGATTGATAATGTGTCTCTTATGGACCAGGATCATCTTGGTTTTTCAGCAGGAAAAGTGGTTGGAGATAATAGGGCTCAACATGTTACATCTTTAACAACTGGTGAAGTTGGGAAGTTTGAAAAAAGGAACAGCAATCTACCTCCTCCTGATCCTTCTTTAGCAGGAGAATTTGATACGAGTCCTTTTCAGGTCATAATGAATGACGATCTTGAAGAGCTGAAGGAACTGGGTTCTGGTACCTTTGGGACTGTGTATCATGGGAAATGGCGGGGAACAGATGTTGCCATTAAAAGAATAAAAAAAATCTGCTTCACTGGTCGATCATCTGAGCAAGAGAGATTGACTGTAGAATTCTGGCGTGAAGCGGAGATTCTTTCTAAGCTTCATCATCCAAATGTGGTGGCATTTTATGGTGTAGTGGAGGATGGACCAGGAGGAACAATGGCTACGGTTGCAGAGTACATGGTGGATGGTTCTCTTAGGCATGTATTACTTCGCAAAGATAGGTATCTTGATCGACGCAAGAGACTGGTAATTGCAATGGATGCAGCTTTTGGAATGGAATATTTGCACTCAAAAAATATTGTACACTTTGACCTAAAATGTGACAATTTGTTGGTGAACTTGAAAGATCCTATGCGGCCTATATGCAAGGTTGGGGATTTTGGCTTGTCAAAAATTAAACGAAATACCTTGGTTTCTGGTGGTGTGCGAGGGACTCTTCCTTGGATGGCACCAGAGCTGCTGAATGGTAGCAGCAACAAGGTCTCAGAAAAGGTTGATGTGTTCTCCTTTGGCATAGTATTATGGGAGATTCTAACTGGTGAGGAGCCATATGCCAATATGCACTATGGTGCAATCATAGGTGGGATTGTGAATAACACATTAAGGCCAACTATCCCAGATCATTGTGATGGGGAATGGAGAACACTGATGGAGCAGTGTTGGGCACCAAATCCTGCAGCCAGGCCATCTTTCACCGAAATAGCGAGTCGACTGCGTGTAATGTCTGCAGCAGCAGCTAGCCAAACCAAAGCACAGAAGGCATCCAAATGA 3570 0.416 MEQSRFQNAVLYNMDPRHDEYHPPGPQSVMQDHLEGTHASRRPADLNTSEVKPVHNYSIRTGEEFALEFMRDRVNITKPVSNVSDSNYTPGYMELKGILGISHPGSESGSDISMLSMVDKYPKEFDRMNTSIPGDRSNYGSIQSMPRTSLNQDNRQFVPGYGSFGVYDRSMMMKFLCSFGGRILPRPCDGKLRYVGGQTRILRIRKDISWQELMQKAFQIYNQVHAIKYQLPGEDLDALVSVSSDEDLQNMMEECNHLLDREGSQKLRMFLFSLSDLEDAQFGISSIGDDSEIQYVVAVNGMDLESRKSTTMFGISFSANDINELDRQSIGRDTSRVGVESIAQGAPLTNNFDSSLATQSSQPVLPTSSNSYDAYPQFYGDQMMRLGEPSDQYIINHGLNPSHKPVIGETPIIMPHMLINPPGIFSEGLPPRGIQVQNSEIPGTLANKMVDSSIQHGSDPGKVLASELPTPAPVQLLNNGYMKNNFPEASVVVTAPEGHSLHPTKMDRLPDYEETYSTSSSAFGPAYVDSQSNASDLSSLHPPPLPKRVYYSERIPREQLELLNRSSKSDDTHSSQLHVSDLLSDVNPPDSAAESSDKLHDGNLPNLSEEFGVAEKPLHADGYAVDNGAVNHQIYKQLPDASSQMKSKLTEHVNPELMQVLSDNGGRKDLLNKDNVVGLETEIYSKNNYNKPLVDETKASKPDLPNLHQVSSDKHLEFDDPASILPEVDWGDTSVKESNEDINVQALPVSINGNTTTEDDSKEFPSNVVSEQVQGDILIDINDRFPREFFTDMFSKAVLEEDPSSLHPLTSDGVGLSVNIENHEPKRWSYFQKLAQEGIDNVSLMDQDHLGFSAGKVVGDNRAQHVTSLTTGEVGKFEKRNSNLPPPDPSLAGEFDTSPFQVIMNDDLEELKELGSGTFGTVYHGKWRGTDVAIKRIKKICFTGRSSEQERLTVEFWREAEILSKLHHPNVVAFYGVVEDGPGGTMATVAEYMVDGSLRHVLLRKDRYLDRRKRLVIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPMRPICKVGDFGLSKIKRNTLVSGGVRGTLPWMAPELLNGSSNKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRPTIPDHCDGEWRTLMEQCWAPNPAARPSFTEIASRLRVMSAAAASQTKAQKASK 1189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g0287 1189 SUPERFAMILY Protein kinase-like (PK-like) 894 1170 IPR011009 -
Aed1g0287 1189 MobiDBLite consensus disorder prediction 582 607 - -
Aed1g0287 1189 CDD PB1_UP2 176 272 - -
Aed1g0287 1189 MobiDBLite consensus disorder prediction 513 539 - -
Aed1g0287 1189 SMART serkin_6 908 1174 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed1g0287 1189 SMART PB1_new 187 274 IPR000270 GO:0005515
Aed1g0287 1189 Gene3D Transferase(Phosphotransferase) domain 1 996 1189 - -
Aed1g0287 1189 CDD STKc_MAP3K-like 914 1171 - -
Aed1g0287 1189 Gene3D - 191 273 - -
Aed1g0287 1189 ProSiteProfiles Protein kinase domain profile. 908 1173 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed1g0287 1189 SUPERFAMILY CAD & PB1 domains 189 276 - -
Aed1g0287 1189 ProSitePatterns Protein kinases ATP-binding region signature. 914 939 IPR017441 GO:0005524
Aed1g0287 1189 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1033 1045 IPR008271 GO:0004672|GO:0006468
Aed1g0287 1189 PANTHER PROTEIN KINASE, PUTATIVE-RELATED 86 874 - -
Aed1g0287 1189 PANTHER PROTEIN KINASE, PUTATIVE-RELATED 873 1189 - -
Aed1g0287 1189 PRINTS Tyrosine kinase catalytic domain signature 1098 1120 IPR001245 GO:0004672|GO:0006468
Aed1g0287 1189 PRINTS Tyrosine kinase catalytic domain signature 1142 1164 IPR001245 GO:0004672|GO:0006468
Aed1g0287 1189 PRINTS Tyrosine kinase catalytic domain signature 1027 1045 IPR001245 GO:0004672|GO:0006468
Aed1g0287 1189 PRINTS Tyrosine kinase catalytic domain signature 990 1003 IPR001245 GO:0004672|GO:0006468
Aed1g0287 1189 Pfam PB1 domain 189 273 IPR000270 GO:0005515
Aed1g0287 1189 PANTHER SERINE-THREONINE PROTEIN KINASE 86 874 - -
Aed1g0287 1189 PANTHER SERINE-THREONINE PROTEIN KINASE 873 1189 - -
Aed1g0287 1189 Pfam Protein tyrosine and serine/threonine kinase 909 1171 IPR001245 GO:0004672|GO:0006468
Aed1g0287 1189 MobiDBLite consensus disorder prediction 498 545 - -
Aed1g0287 1189 Gene3D Phosphorylase Kinase; domain 1 901 995 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g0287 Aed-Chr1 4589859 4597179 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g0287 26 601 MAP Kinase Kinase Kinase AT1G16270 37.652 2.16e-92 320
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-6 Aed1g0287 PK_Tyr_Ser-Thr 1.1e-62 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g0287 - - gmx:100799639 1573.53