Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g0286 ATGCAGAAACATCAATACAATTCCATGGAACCTAGAAAGGAGGAGTTCCATTCTGCACCGCAGTTGGTCCAGCAAGACCTTCGCGATGGCATGCATATCAATGTGAGGCCTCCGGCATTTAACATGTCAGAGAATAAACCTGTTCTTAATTATTCCATACAGACTGGTGAGGAGTTTTCTCTTGAGTTTATGAGAGATAGGGTGAATCTCAGGAAGCCTTCCTTTCCAAATGTTGTGGTTGATCCCAATTATTCAACCAGCTATATGGAATTGAAAGGAATTTTAGGCCACCCAGGATCTGAGAGTGGATCAGATATCTCTGTGCTCACAAAGGTTGAAAAGGTTCCAAAAGAGTTTGACAGAAGGAACTCTTCTCAACACCACCAGGACAACAGAAGTAACTATGGTTCGGCTCGATCAATTCCTAGAACTTCGTCTAATCAAGACGGTTACCAAGTCCTTCACGGTACTTCCTCTTCTAGTGTTTCTGAAAGTGCATCAATGAAGATGAAGGTTCTATGCAGCTTTGGGGGTAGAATACTGCCACGGCCTAGTGATGGAAAGCTTAGATATGTTGGGGGTGAAACGCGTATTATCAGTATAAGAAGGGACATACGTTTTCACGAGCTTATGCTTAAAACATCATCAATCTATAGTGAAGTTCATGTGATAAAATATCAGCTTCCTGGAGAAGATCTTGATGCATTGGTCTCGGTATCGTCTGATGAGGATCTGCGGAATATGATGGAGGAATGTCATGATCTACAAGGTGGACGAGGATCGACCAAGCTTAGGATTTTTCTGTTCTCTATAAATGATTTGGATGATACTCAATTCGGTATAGGTAGCATTGATGGTGGTGATTCTGAAATCCAGTATGTAGTTGCTGTTAATGGTATGGATGTTGGTTCAAGAAGCAACTCAATCCTTCATGGTTTAAGCGGCTCTACGAATAACTTGCATGAATTGCATGGACAAAATAACGAGAGGGAGACCAACAGAGTTCTTATGAACACATTTGGTGTTAGCAGTTCATCCTTGACTGACAATGTTAAACCATCATTGACTATTCAATCTTCACAACCAGTGATTCCAATCTCCTCTAGTGCTTATGAAACTCATCCATTGTTTTATGACGACCATGTCATTCACCATGGGGAAGCTAATCAATATCCACTACAGCATGGTCTTGGTCCTTCTAACAACTCCGCTCGCAATCTTGGGGAGATTCCAGTTTCTGTGCCAACTCATGGTCTTGTTAGCCAAGGAATCATGAATGATGGTCTAGCATCCAGTGAGTTGCAGGTGCAAATTTCAGCTATGCCAGAAGTGCTGATAAAAAGAAAGGGTGAGAATTTCCCCTTGGAAGCACCATCATATCCTATTCCTTCACCGCCGTTTGAGGGCAATTTGAATGCTAATTTATCAGAGGCATCAGCTACAGCTGCTATATCAGAAGGGCTTCATCCTGCACTGCAATCAAAGAACAAGGGTAAGCACCAGCAGTCTGAAGATGCCTCTTCATTGATTAGTAGTATGAATCCCTCACAGACTCCTCAGTCTGGCGAAGATGACTTCTATACTTCATCCACCGATGCATTCAGCCGTGTTCATGTTGATGCTGAGTCCAATGTGATTGATTTCAGTTACCTTGAACCACCTCCACTTCCCAACAGAGTCTATTATTCAGAGAGAATTCCAAGGGAGCAGGCAGATTTGCTGAACCGATCTACAAAGTCGGACGATGCTCATGGCTCTCACTTGCTCATGGCAGATTTGCTTTCTGACTTCAGTCAGAATAACTCAGTTACAGAATCCAATGACATATTGCACAGTGGCAATATGCCAAATCTGAACATGATGTCCAGCTCATCAGCAAAGCCTTTGCAAGCAGATGATGGACTTGCCCTGCCACAGGCATACAAACAGTTGCCCGATACAACAACTAAGGTGAATTCAAAGTTATCACAGCATGTGAATTCTGAGTCAAAGCAAGTGTTAGAAGATAATAAAGTTTCTAGAAATGAGGATCAGGTCCTTAGTTCTGATCAAAATGAAACCAAAGGTACTGAACATCTAGCATCTAAACTTCCAGACCTCAATTTGGAGGTTTCTACCAGGGAATCTGATAACGATACTAAGGTGGCTCAGTCGCAGCCTTTTCCTTTAACTGGAAACACAGGCCAAGATGTTTCTCAGGATTTTCCCTCAGAAGCTAAATCCAGACCTACAACTCAGGGCGACATTCTGATTGATATTGAGGACAGGTTTCCTCGTGATTTCCTCTATGACATGTTCTCCAAAGCAGTAATTCCTGAAGATTCCTCAAGCAGTGGTCCATTACCAACAGATAGAGCAGGTTTGAGCTTAAACATGGACAATCATGAGCCTAAACGTTGGTCATATTTTCAGAACTTGGCTCAAGAGGGGTTTGATAATGTGTCTCTAATTGATCAGGATAGTCTTGGCTTTTTGTCTGCTGCGAGAAAAGTACAAGAGGGGGATAGTAAATCTCAGCCATCTGCTCCTCTACCAGCTGATGGTGTTTTGGCAGGACGCACGGAATCTCACCTTAATTTTGTTGAAGAAAATCAGAAAAATGTACCTGTAACAACTCAAACAGAAGCAAGTATCTTTCACCAAAACTATGAGCATTCCCAACTAAAGGGCAATGAAAATAAGAACATGGATGCCATAATGGAAAACATACTACCACAGGAGTCTGAATACCAGGATGACAAGAATGAACCAAAGAATGTGGTTGTAGCAGGGGAGTTTGACACCAGTACTTTCATAAAGAATGAAGATCTTGAAGAACTGCGAGAGCTGGGTTCTGGTACCTTTGGAACTGTGTACCATGGAAAATGGAGGGGCTCAGATGTTGCAATTAAACGAATAAAGAAAAGCATCTTTGCCGGTCGATCTTCAGAACAAGAGAGACTGACCATAGAGTTCTGGCGGGAAGCAGACATACTTTCCAAGCTTCACCATCCAAATGTGGTGGCGTTTTATGGTGTAGTTCACGATGGACCAGGAGCAACATTAGCAACTGTTACTGAGTATCTTGATCGCCGCAAGAGACTGATAATTGCCATGGATGCGGCTTTTGGAATGGAATATTTACATGCAAAAAATATTGTGCATTTTGACTTGAAATGTGACAATTTGCTTGTGAACTTGAAGGATCCTCTACGACCAATATGCAAGGTTGGCGATTTTGGCCTGTCAAAGATTAAGCGAAACACCTTGGTTTCTGGCGGTGTTCGGGGAACTCTACCTTGGATGGCACCAGAGCTGCTAAATGGTAGCAGCAATAAGGTCTCAGAAAAGGTTGATGTGTTCTCTTTTGGCATTGTATTATGGGAGATTCTTACTGGTGATGAGCCATATGCTAATATGCACTATGGTGCAATTATAGGAGGCATTGTGAATAACACATTAAGACCTACAATCCCCAGTTATTGTGACATTGAGTGGAAAACACTAATGGAGCAGTGTTGGGCACCCAACCCTTCAGTCAGGCCATCCTTCACAGAAATTGCTCGCCGCTTGCGCGTGATGTCTGCAGCTGCTACTCAGCTCAAAGGACAGGGCCAGAAGGCATCTAAGTGA 3612 0.428 MQKHQYNSMEPRKEEFHSAPQLVQQDLRDGMHINVRPPAFNMSENKPVLNYSIQTGEEFSLEFMRDRVNLRKPSFPNVVVDPNYSTSYMELKGILGHPGSESGSDISVLTKVEKVPKEFDRRNSSQHHQDNRSNYGSARSIPRTSSNQDGYQVLHGTSSSSVSESASMKMKVLCSFGGRILPRPSDGKLRYVGGETRIISIRRDIRFHELMLKTSSIYSEVHVIKYQLPGEDLDALVSVSSDEDLRNMMEECHDLQGGRGSTKLRIFLFSINDLDDTQFGIGSIDGGDSEIQYVVAVNGMDVGSRSNSILHGLSGSTNNLHELHGQNNERETNRVLMNTFGVSSSSLTDNVKPSLTIQSSQPVIPISSSAYETHPLFYDDHVIHHGEANQYPLQHGLGPSNNSARNLGEIPVSVPTHGLVSQGIMNDGLASSELQVQISAMPEVLIKRKGENFPLEAPSYPIPSPPFEGNLNANLSEASATAAISEGLHPALQSKNKGKHQQSEDASSLISSMNPSQTPQSGEDDFYTSSTDAFSRVHVDAESNVIDFSYLEPPPLPNRVYYSERIPREQADLLNRSTKSDDAHGSHLLMADLLSDFSQNNSVTESNDILHSGNMPNLNMMSSSSAKPLQADDGLALPQAYKQLPDTTTKVNSKLSQHVNSESKQVLEDNKVSRNEDQVLSSDQNETKGTEHLASKLPDLNLEVSTRESDNDTKVAQSQPFPLTGNTGQDVSQDFPSEAKSRPTTQGDILIDIEDRFPRDFLYDMFSKAVIPEDSSSSGPLPTDRAGLSLNMDNHEPKRWSYFQNLAQEGFDNVSLIDQDSLGFLSAARKVQEGDSKSQPSAPLPADGVLAGRTESHLNFVEENQKNVPVTTQTEASIFHQNYEHSQLKGNENKNMDAIMENILPQESEYQDDKNEPKNVVVAGEFDTSTFIKNEDLEELRELGSGTFGTVYHGKWRGSDVAIKRIKKSIFAGRSSEQERLTIEFWREADILSKLHHPNVVAFYGVVHDGPGATLATVTEYLDRRKRLIIAMDAAFGMEYLHAKNIVHFDLKCDNLLVNLKDPLRPICKVGDFGLSKIKRNTLVSGGVRGTLPWMAPELLNGSSNKVSEKVDVFSFGIVLWEILTGDEPYANMHYGAIIGGIVNNTLRPTIPSYCDIEWKTLMEQCWAPNPSVRPSFTEIARRLRVMSAAATQLKGQGQKASK 1203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g0286 1203 CDD PB1_UP2 173 269 - -
Aed1g0286 1203 Gene3D - 188 271 - -
Aed1g0286 1203 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1046 1058 IPR008271 GO:0004672|GO:0006468
Aed1g0286 1203 ProSitePatterns Protein kinases ATP-binding region signature. 943 968 IPR017441 GO:0005524
Aed1g0286 1203 PRINTS Tyrosine kinase catalytic domain signature 1040 1058 IPR001245 GO:0004672|GO:0006468
Aed1g0286 1203 PRINTS Tyrosine kinase catalytic domain signature 1155 1177 IPR001245 GO:0004672|GO:0006468
Aed1g0286 1203 PRINTS Tyrosine kinase catalytic domain signature 1111 1133 IPR001245 GO:0004672|GO:0006468
Aed1g0286 1203 Gene3D Transferase(Phosphotransferase) domain 1 1020 1203 - -
Aed1g0286 1203 CDD STKc_MAP3K-like 943 1184 - -
Aed1g0286 1203 MobiDBLite consensus disorder prediction 609 630 - -
Aed1g0286 1203 MobiDBLite consensus disorder prediction 648 744 - -
Aed1g0286 1203 MobiDBLite consensus disorder prediction 711 744 - -
Aed1g0286 1203 Pfam PB1 domain 186 269 IPR000270 GO:0005515
Aed1g0286 1203 Gene3D Phosphorylase Kinase; domain 1 923 1019 - -
Aed1g0286 1203 MobiDBLite consensus disorder prediction 503 528 - -
Aed1g0286 1203 SUPERFAMILY Protein kinase-like (PK-like) 929 1183 IPR011009 -
Aed1g0286 1203 MobiDBLite consensus disorder prediction 492 528 - -
Aed1g0286 1203 MobiDBLite consensus disorder prediction 648 663 - -
Aed1g0286 1203 Pfam Protein tyrosine and serine/threonine kinase 938 1184 IPR001245 GO:0004672|GO:0006468
Aed1g0286 1203 SMART PB1_new 184 271 IPR000270 GO:0005515
Aed1g0286 1203 SUPERFAMILY CAD & PB1 domains 185 277 - -
Aed1g0286 1203 ProSiteProfiles Protein kinase domain profile. 937 1186 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed1g0286 1203 PANTHER SERINE-THREONINE PROTEIN KINASE 84 1203 - -
Aed1g0286 1203 MobiDBLite consensus disorder prediction 117 162 - -
Aed1g0286 1203 PANTHER PROTEIN KINASE, PUTATIVE-RELATED 84 1203 - -
Aed1g0286 1203 SMART serkin_6 937 1187 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aed1g0286 1203 MobiDBLite consensus disorder prediction 129 162 - -
Aed1g0286 1203 MobiDBLite consensus disorder prediction 609 629 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g0286 Aed-Chr1 4580447 4588385 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g0286 7 1113 MAP Kinase Kinase Kinase AT1G79570 43.884 0.0 801
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-6 Aed1g0286 PK_Tyr_Ser-Thr 2.8e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g0286 - - gmx:100799118 2097.01