Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g0282 ATGGCATCAGAAAAAGGTGAATCATCGAACTCCGTTACGCTAGAGCATGCATTGGAAGAAGAAGAATCAAATCCAAAAAAGATGAAGATCACTTCAGGAGAAGAAGAAGAAAAAGAGAAAGAGGTTTTCATTAAGCTGAAAACCTCAGACGAAGTAATCTTCGACGTGGAGGCCTCCATCGTGAAGGAGATGAAGACGCTGCAGAGCTGCATCGACGACACTGCCACCGACTCCTCCGTCGCAATTCCACTCCTGAACGTGACCAGCCGCAACCTCCGGCACATCATCACGCTGAAGCACGACGAAGCGCTCGTCGAGAAGCTGAGCTTCGACGAGCGGCAGGAGGTGCTGGTGGCCGCGGACTATCTGAACATGAGGAGCATGATCGATTTCCTGGCCCAGAACATGGCGCGCTGCATCAAGAACGAGAGCGTGGAGTTCGTCAGGGCGTTCTTCAAAGTCATCAACGATTACTCGCCGGAGGAGGAGGCGGAGTGCCGCAAGGAAAACGAGTGGGCCTTTCAGAACATCCACATCGACGACCCTTAA 549 0.5228 MASEKGESSNSVTLEHALEEEESNPKKMKITSGEEEEKEKEVFIKLKTSDEVIFDVEASIVKEMKTLQSCIDDTATDSSVAIPLLNVTSRNLRHIITLKHDEALVEKLSFDERQEVLVAADYLNMRSMIDFLAQNMARCIKNESVEFVRAFFKVINDYSPEEEAECRKENEWAFQNIHIDDP 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g0282 182 SUPERFAMILY POZ domain 43 96 IPR011333 -
Aed1g0282 182 Pfam Skp1 family, tetramerisation domain 43 97 IPR016073 GO:0006511
Aed1g0282 182 PANTHER SKP1 44 176 IPR016897 GO:0006511
Aed1g0282 182 SUPERFAMILY Skp1 dimerisation domain-like 101 173 IPR036296 GO:0006511
Aed1g0282 182 MobiDBLite consensus disorder prediction 1 38 - -
Aed1g0282 182 Pfam Skp1 family, dimerisation domain 128 173 IPR016072 GO:0006511
Aed1g0282 182 Gene3D Potassium Channel Kv1.1; Chain A 39 175 IPR011333 -
Aed1g0282 182 MobiDBLite consensus disorder prediction 14 38 - -
Aed1g0282 182 SMART skp1_3 41 125 IPR001232 GO:0006511
Aed1g0282 182 PANTHER SCF UBIQUITIN LIGASE, SKP1 COMPONENT 44 176 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g0282 Aed-Chr1 4547085 4547633 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g0282 K03094 - gmx:100803525 177.178
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g0282 1 4547085 4547633 Aed1g0282 1 4547085 4547633 ECH