LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Aed1g0273	ATGGGGTTAACTTCTGGTTCTACATCCACACCGGAAAGTGTTGTCACTGCAGGAACCCTAAGGAAACAAACCGGGCTTCTAAACTACAAAGAAGACAACAAGGATGGTGATTGGTCTGAGTTGGAAGTTGAGGCTTTGTGGAATCTTGTTAAGAAATATGGTGCAGGTAACTGGAATGCCATAATGGGAGATCCAGATTTACAAATCCTTAGAGGCAAAACTGAGAAACATCTAACAGAAAAGTGGAATATGGAGACTTTCAAAATGTCTCTATCTGCACCAAACAGAAGTGTGCTTCTTCCTGTGACAGAAAATACATCAAAACATCATGCTTCACAAGGAAATGGATCATTGTTCTCAAACTTTCCAATCCACATGCCTAGACATGGCATTCATCCATTCCATGTTGGTGTAAGGAATGAAGGCCTCAACTTGGGATCAAGGATCATGCCCTCTTCCTCAAATCATATCTTTGATCCTTACCATCATGAAGGATCTTCCTCCTCAAGTGCTTTTCATTCATTTCAACCATTGGCTGGTGCTCATATGAGGCAAGCAAATGTCAACTTCAACACAATGACTTCACCATTATCTCTGAGTGCTACAAGAGTTTCTCCTCCATCCAATGTTGAGACTGAAGCTCAACCTCAGTTCCTGTTGTGTGGTGTAGTGCCGCTTCAGAATATTGTGACACTGAACAAAAATGCAGGTCATGATGCTGGAAATACCAAGTGA	735	0.4177	MGLTSGSTSTPESVVTAGTLRKQTGLLNYKEDNKDGDWSELEVEALWNLVKKYGAGNWNAIMGDPDLQILRGKTEKHLTEKWNMETFKMSLSAPNRSVLLPVTENTSKHHASQGNGSLFSNFPIHMPRHGIHPFHVGVRNEGLNLGSRIMPSSSNHIFDPYHHEGSSSSSAFHSFQPLAGAHMRQANVNFNTMTSPLSLSATRVSPPSNVETEAQPQFLLCGVVPLQNIVTLNKNAGHDAGNTK	244

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Aed1g0273	244	Pfam	Myb-like DNA-binding domain	36	84	IPR001005	-
	Aed1g0273	244	ProSiteProfiles	Myb-like domain profile.	30	86	IPR001005	-
	Aed1g0273	244	CDD	SANT_TRF	38	85	-	-
	Aed1g0273	244	SUPERFAMILY	Homeodomain-like	34	85	IPR009057	-
	Aed1g0273	244	Gene3D	-	28	88	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Aed1g0273	Aed-Chr1	4494476	4495210	Tandem

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	MYB-related	Aed1g0273		Myb_DNA-binding	7e-06	CL0123

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Aed1g0273	-		-	var:108333487	178.718