Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g0272 ATGGGGTTAGCTTCTCGTTCTGCATCCACACTCGAAAGTATTGTCACTGCAGGAACCCTAAGAAAACATACAGGGATTCCAGAAGATCACAAGGATGGAGATTGGTCTCAATTGGAACTTGAGGCTTTGTGGAATCTTGTTAGAAAGCATGGTTCAGGTAACTGGAATGCCATAATTGGAGATCCAGATTTGCAAATCCTAAGGGGCAAAACTGAAAAACAACTAACCGAAAAGTGGAAGATGGAGACTTTCAAAATGTGTCCACCTGTGCCAAACAGAAGTGTGCTTCTTCCTGTGGCAGCAAATACATCAAAACATCATGAAAGAAGGAATGAAGGAAATGGATTTTTCTCAAACATGCCACTTCACATTCCTAGACATGGCATTCATCCATTCCATGTTGGTGTAAGGAATGTAGGCCTCAACTTGGGATCAAGGATCATGCCCTCTTCCTCAAATCATATCTTTGGTCCTTACCATCATGAAGGATCTTCCTCCTCAAGTGCTTTTCATTCATTCCAGCCCTTGGCTGGTTCACATATGAGGAAAGCAAATGCCAACTTCAACACCATGACTCCTCCACAACATCTGGCTCCAAATCTGTATATGAACCCTAATCTGCTGGCTCCTCCACAACATCTGACTCCTCCACAACCCTTGGCTGGTTCTCATATGAGGAAAGCAAATGCCAACTTCAACACCATGACTCCTCCACAACATCTGGCTCCAAATCTGTATATGAACCCTAATCTGCTGGCTCAAACTCCACCATTATCTCTCAGTACTGCTACAAGAGTTTCTCCTCTGGCTAATGTTGAAACTGATGCTCAACCTCAGTTACTGTTGTTGGGTGGTTTAGTGCCGCTTCGGAATAATATGAAACTGATGAACAAAAATGCAGGCCATGATACTGGCAATACTAAGTGA 927 0.4337 MGLASRSASTLESIVTAGTLRKHTGIPEDHKDGDWSQLELEALWNLVRKHGSGNWNAIIGDPDLQILRGKTEKQLTEKWKMETFKMCPPVPNRSVLLPVAANTSKHHERRNEGNGFFSNMPLHIPRHGIHPFHVGVRNVGLNLGSRIMPSSSNHIFGPYHHEGSSSSSAFHSFQPLAGSHMRKANANFNTMTPPQHLAPNLYMNPNLLAPPQHLTPPQPLAGSHMRKANANFNTMTPPQHLAPNLYMNPNLLAQTPPLSLSTATRVSPLANVETDAQPQLLLLGGLVPLRNNMKLMNKNAGHDTGNTK 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g0272 308 ProSiteProfiles Myb-like domain profile. 27 83 IPR001005 -
Aed1g0272 308 SUPERFAMILY Homeodomain-like 30 83 IPR009057 -
Aed1g0272 308 SMART sant 31 85 IPR001005 -
Aed1g0272 308 CDD SANT_TRF 35 80 - -
Aed1g0272 308 Pfam Myb-like DNA-binding domain 33 80 IPR001005 -
Aed1g0272 308 Gene3D - 27 84 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g0272 Aed-Chr1 4481706 4482632 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Aed1g0272 Myb_DNA-binding 1.5e-05 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g0272 - K09422 var:108333487 149.443