Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g0270 ATGGCCGCTTCCTCGCTCCTCAGATCCGCGATTCTCGCTCCTTCCTCCTCCTCCTCCGATCGCTCCAAGATATTTAGCAATGCCTTGAGTTCTGGTTTAAAATCTAAGGGACTACAGAGCAGCATATTTGGTACTTCAATTCAATGTGACTCATTAGTTTTACAAAACTGCAATGCTCATGGCATCCAGCCTATTAAAGCCACTGCAACGGAAATCCCTCTCCCCACCAAGCAATCAAGGAGCACTGGGAAGACAAGAGTTGGAATAAATGGTTTTGGTAGAATTGGAAGGTTGGTGTTGCGTGTAGCTACTTCCCGAGATGATATTGATGTTGTTGCAATTAATGATCCATTCGTTGATGCAAAATATATGGCGTACATGTTCAAATATGATTCTACTCATGGTCCATTCAAGGGGTCCATTAAGATTTTGGATGATTCTACTTTGGAAATTAATGGGAAACAGGTTAAAGTTGTGAGCAACAGAGATCCTGCAGAGATCCCATGGAGTGATTTTGGGGCTGATTATGTCATTGAGTCTTCAGGAGTTTTTACAACATTGGAGAAAGCTTCATTACATTTGAAGGTGGTTAATGAAGAGTTTGGAATAGTTGAAGGTTTGATGACAACTGTACATGCAACAACAGCAACACAGAAGACTGTAGATGGCCCTTCTATGAAGGATTGGCGAGGTGGAAGAGGGGCAGCTCAAAATATTATTCCAAGTTCAACTGGTGCTGCGAAGGCTGTTGGGAAAGTTCTTCCTGAGCTAAATGGTAAACTCACTGGGATGGCATTCCGTGTACCGACTCCCAATGTTTCTGTGGTGGACTTGACTTGCCGGCTTAGGAAGAATGCTAACTACGAAGATGTTAAAGCAGCAATTAAGTATGCCTCAGAGGGATCACTGAAAGGAATCCTTGGTTACACAGACGAGGATGTTGTCTCTAATGACTTTGTTGGTGATTCAAGGTCAAGTATCTTTGATGCTAAGGCTGGCATTGCACTTAGTTCTTCCTTTGTTAAGCTGGTTTCGTGGTATGACAATGAGTGGGGTTACAGCAACCGAGTATTGGACCTTATAGAGCACATGGCATTGGTGGGAGCTCAAAATTGA 1116 0.4319 MAASSLLRSAILAPSSSSSDRSKIFSNALSSGLKSKGLQSSIFGTSIQCDSLVLQNCNAHGIQPIKATATEIPLPTKQSRSTGKTRVGINGFGRIGRLVLRVATSRDDIDVVAINDPFVDAKYMAYMFKYDSTHGPFKGSIKILDDSTLEINGKQVKVVSNRDPAEIPWSDFGADYVIESSGVFTTLEKASLHLKVVNEEFGIVEGLMTTVHATTATQKTVDGPSMKDWRGGRGAAQNIIPSSTGAAKAVGKVLPELNGKLTGMAFRVPTPNVSVVDLTCRLRKNANYEDVKAAIKYASEGSLKGILGYTDEDVVSNDFVGDSRSSIFDAKAGIALSSSFVKLVSWYDNEWGYSNRVLDLIEHMALVGAQN 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g0270 371 PANTHER GLYCERALDEHYDE 3-PHOSPHATE DEHYDROGENASE 1 195 IPR020831 GO:0016620
Aed1g0270 371 PANTHER GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE GAPCP1, CHLOROPLASTIC 195 369 - -
Aed1g0270 371 PANTHER GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE GAPCP1, CHLOROPLASTIC 1 195 - -
Aed1g0270 371 SMART gp_dh_n_7 85 200 IPR020828 GO:0051287
Aed1g0270 371 Gene3D Dihydrodipicolinate Reductase; domain 2 191 349 - -
Aed1g0270 371 PRINTS Glyceraldehyde-3-phosphate dehydrogenase signature 303 318 IPR020831 GO:0016620
Aed1g0270 371 PRINTS Glyceraldehyde-3-phosphate dehydrogenase signature 206 222 IPR020831 GO:0016620
Aed1g0270 371 PRINTS Glyceraldehyde-3-phosphate dehydrogenase signature 263 280 IPR020831 GO:0016620
Aed1g0270 371 Pfam Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 86 186 IPR020828 GO:0051287
Aed1g0270 371 PANTHER GLYCERALDEHYDE 3-PHOSPHATE DEHYDROGENASE 195 369 IPR020831 GO:0016620
Aed1g0270 371 SUPERFAMILY Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 194 347 - -
Aed1g0270 371 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 84 213 IPR036291 -
Aed1g0270 371 Pfam Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 194 347 IPR020829 GO:0016620
Aed1g0270 371 Gene3D - 87 190 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g0270 Aed-Chr1 4459227 4464587 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g0270 K00134 - gmx:100804853 628.632
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g0270 1 4459227 4464587 Aed1g0270 1 4459227 4464587 ECH