Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g0268 ATGCACAAATTGGGAAGAGGTCAACGTGACAAACTCCAGCAGTTCATAACAATAACTGGAGCCAGCGAAAAAATAGCACTGCAGGCTCTGAAGGCTAGTGATTGGCATCTTGAAGGAGCATTTGATTTCTTTTACAGCCAACCCCAGCTTAAAACATTTACTGATTCTAGGCACTTGGAGGAGCTATACAATAGATATAAAGATACATATGTTGATATGATTTTGGCAGATGGCATCACTGTCCTTTGCAATGATATCCAGGTGGATCCTCAAGATATAGTAATGTTAGTTCTTTCATGGCACATGAAGGCTGGTACAATGTGTGAATTTTCCAAGAAGGAGTTTATTGAAGGTTTACAATCTTTGGGGATTGATTCTCTGGAAAAGTTCCGTGAAAAGATACCATATATGCGCTCTGAGCTGAAAGATGAACAGAAATTCCGCGAGATATATAACTTTGCATTTGGCTGGGCAAAAGAGAAGGGTCAAAAATCTCTTGCATTGGATACAGCTATTGGTATGTGGCAATTATTATTTGCTGAGAAGCAGTGGCCACTGGTTGACCATTGGAACCAGTTCTTGCAGGCTCGGCATAACAAAGCAATATCTAGGGACACATGGTCTCAGCTTTTGGAGTTTGCCAAGACTGTTGCCTCAAATTTATCTGATTATGATGCCGAAGGTGCTTGGCCATATCTTATTGATGAATTTGTGGAGTATCTGAACGAGAATGGCGTCATCCAAAATGGTCTGTTCAATGATTCTAGTCTAAACCGATGA 780 0.4064 MHKLGRGQRDKLQQFITITGASEKIALQALKASDWHLEGAFDFFYSQPQLKTFTDSRHLEELYNRYKDTYVDMILADGITVLCNDIQVDPQDIVMLVLSWHMKAGTMCEFSKKEFIEGLQSLGIDSLEKFREKIPYMRSELKDEQKFREIYNFAFGWAKEKGQKSLALDTAIGMWQLLFAEKQWPLVDHWNQFLQARHNKAISRDTWSQLLEFAKTVASNLSDYDAEGAWPYLIDEFVEYLNENGVIQNGLFNDSSLNR 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g0268 259 Gene3D Cullin, PONY binding domain 143 250 IPR042460 -
Aed1g0268 259 PANTHER DEFECTIVE IN CULLIN NEDDYLATION PROTEIN 13 249 - -
Aed1g0268 259 Pfam Cullin binding 130 240 IPR005176 -
Aed1g0268 259 PANTHER RP42 RELATED 13 249 IPR014764 -
Aed1g0268 259 Pfam UBA-like domain 9 47 - -
Aed1g0268 259 SUPERFAMILY UBA-like 7 46 IPR009060 GO:0005515
Aed1g0268 259 Gene3D - 6 47 - -
Aed1g0268 259 CDD UBA_DCNL 8 48 - -
Aed1g0268 259 ProSiteProfiles DCUN1 domain profile. 54 242 IPR005176 -
Aed1g0268 259 Gene3D - 53 142 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g0268 Aed-Chr1 4430121 4435159 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g0268 K17822 - gmx:100527072 514.227
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g0268 1 4430121 4435159 Aed1g0268 1 4430121 4435159 ECH