Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g0230 ATGTTGTTAATGAAACACACGAGGCTCCACTACCTTACACTTTTCCTCCTTTTGGTCCCTTTGTTGGAGCGGAACACCATTTATGGTCTCTCCACACAGGTAAATGTGCCTCCTGAGGCCTTGCTGTCCATTGGTCACTATCACACAACATGTCCTGTTGCTGAGGGCATCATCTCACAAAAGGTTGCTTCTTGGGTTAAGAAGGACCCCACTTTGGCCCCTGCTATCATACGCCTTCATTTCCATGACTGTGCTGTTAGGGGATGCGATGGATCAATCTTGCTAAACCACCAAGGAAGTGAGAGGACTGCAATAGAGAGCAAAACCCTGAGAGGCTTCCAACTAATAGAAGACATCAAAACCGAGTTAGAAAAAAAGTGTCCAAAAACAGTGTCTTGTGCTGACATCCTCACAGCTGCAGCAAGAGATGCCACACTCATGGCTGGAGGGCCCTTCTGGGAGGTCCCATTTGGCCGAAAAGACGGCAAAATCTCCATAGCCAGAGAAGCCAACATGGTCCCTCATGGCCATGAAAACATAACATCCTTAATCACATTCTTTAAGGAAAAAGGGTTGGACACTCTTGACTTGGTCACTCTCTCAGGCTCTCACACAATTGGGAGGAGCACATGCTCTTCAATCATGGACAGGATTAGCAACTTCAATGGGACTCAAAAGCCTGATCCTTTACTCAGTGTCTATTTCTTGAAGCTGTTGAGGAAGAGGTGCAAAAGAGTGGTGGATTTGGTGCACCTTGATGTCATAACACCTAGGACTTTTGACACAATGTATTACACCAACCTTGTGAGGAAAGTGGGGCTGCTTTCAACGGATCAGGGGCTGTTTTCTGATGTGAGGACTGCTCCTTTTGTTGAAGCGTTTGCAACGCAGCCTTTTCTTTTCACTAGCCAGTTTTCTGTGTCTATGGTGAAGCTTGGGAATGTTCAGGTTTTGACTAGGCCTAATGAGGGTGAAATCAGAGTAGATTGCAGTTATGTCAATGCTGTGTAG 1011 0.4619 MLLMKHTRLHYLTLFLLLVPLLERNTIYGLSTQVNVPPEALLSIGHYHTTCPVAEGIISQKVASWVKKDPTLAPAIIRLHFHDCAVRGCDGSILLNHQGSERTAIESKTLRGFQLIEDIKTELEKKCPKTVSCADILTAAARDATLMAGGPFWEVPFGRKDGKISIAREANMVPHGHENITSLITFFKEKGLDTLDLVTLSGSHTIGRSTCSSIMDRISNFNGTQKPDPLLSVYFLKLLRKRCKRVVDLVHLDVITPRTFDTMYYTNLVRKVGLLSTDQGLFSDVRTAPFVEAFATQPFLFTSQFSVSMVKLGNVQVLTRPNEGEIRVDCSYVNAV 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g0230 336 PRINTS Haem peroxidase superfamily signature 149 161 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aed1g0230 336 PRINTS Haem peroxidase superfamily signature 253 268 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aed1g0230 336 PRINTS Haem peroxidase superfamily signature 73 87 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aed1g0230 336 PRINTS Haem peroxidase superfamily signature 131 148 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aed1g0230 336 PRINTS Haem peroxidase superfamily signature 196 211 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aed1g0230 336 Gene3D - 45 334 - -
Aed1g0230 336 CDD secretory_peroxidase 42 333 IPR033905 GO:0004601|GO:0042744
Aed1g0230 336 Pfam Peroxidase 59 296 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aed1g0230 336 Gene3D Peroxidase, domain 2 174 312 - -
Aed1g0230 336 PANTHER PEROXIDASE 25-RELATED 27 333 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aed1g0230 336 ProSiteProfiles Plant heme peroxidase family profile. 41 334 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aed1g0230 336 PANTHER PEROXIDASE 27 333 - -
Aed1g0230 336 SUPERFAMILY Heme-dependent peroxidases 42 334 IPR010255 GO:0004601|GO:0006979|GO:0020037
Aed1g0230 336 ProSitePatterns Peroxidases active site signature. 73 84 IPR019794 GO:0004601
Aed1g0230 336 ProSitePatterns Peroxidases proximal heme-ligand signature. 196 206 IPR019793 -
Aed1g0230 336 PRINTS Plant peroxidase signature 111 124 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aed1g0230 336 PRINTS Plant peroxidase signature 130 140 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aed1g0230 336 PRINTS Plant peroxidase signature 195 207 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aed1g0230 336 PRINTS Plant peroxidase signature 267 284 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aed1g0230 336 PRINTS Plant peroxidase signature 307 320 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aed1g0230 336 PRINTS Plant peroxidase signature 149 164 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aed1g0230 336 PRINTS Plant peroxidase signature 75 95 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aed1g0230 336 PRINTS Plant peroxidase signature 51 70 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aed1g0230 336 PRINTS Plant peroxidase signature 251 266 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g0230 Aed-Chr1 3861067 3863665 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g0230 37 335 Peroxidase AT1G30870 50.166 7.83e-107 314
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g0230 K00430 - gmx:100792775 570.466
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g0230 1 3861067 3863665 Aed1g0230 1 3861067 3863665 ECH