Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g0194 ATGGGGTTGTCGTCGGCAAAGCGCGAGATGATAGAATGCAAGGTTGGGGAAGGGAAGGAAAGTGAGACCTGCAGGAAGCAAAATCCTACTAGAAATAAAAATGGCCTCAAGGCCCAAATAAACCCTAATTTCTCAAACTCTTCAGAGAGGGCAGGCACACAACAAACACCCCCAACACCTCTCCTGCCTCCCGGAGCCATGGCCGCCGCCGACTCCTCCGCCGCCACGTCACGCCAGCTGACGCAGAGGGAGACGGACATCCAGATGATGCTCGCCGCCGACGTTCACCTCGGCACCAAAAACTGCGACTTTCAGATGGAACGCTACGTCTTCAAGCGCCGCACTGACGGTATATACATAATTAACCTTGGCAAGACATGGGAGAAGCTCCAGCTCGCTGCTAGGATTATCGTTGCCATTGAGAACCCACAGGATATCATTGTTCAGTCTGCCAGGCCTTATGGTCAGAGGGCAGTTCTCAAATTTGCTCAATACACTGGTGCTCATGCGATCGCAGGAAGGCACACTCCTGGAACATTCACTAATCAGATGCAGCAATCCTACAATGAGCCTCGTCTTCTAATTCTAACTGACCCAAGAACAGATCATCAGCCTATCATCGAAGGTGCTCTTGGAAATATTCCAACTATTGCATTTTGTGACACTGATTCCCCAATGCGGTATGTTGATGTTGGGATTCCCGCCAATAACAAGGGGAAGAATAGCATTGGCTGTCTCTTTTGGCTATTAGCTAGGATGGTACTGCAGATGCGCGGTACTATTCGTCCAGGGCACAAGTGGGATGTAATGGTGGATCTATTCTTCTATAGAGAACCTGAGGAGGCCAAGCAACAAGAGGAAGATGAGGCACCAGCTGGCCAAGATTATGCCATTTCAGACTTCAATGCTGCTGGCATTGGCAGCTTCCCTGCCGCTGACGGCCAATGGCCCACTGCAGTCGAACAACCCTGGACTGAAGAAGCTTCACAACCAATCCCAGCAGTTCCTACTAACTGGGTCCCAGAAACAACTGCTGCAGGAGATTGGGGTGAGGCTGTTGCAGCTCCAGCAACAGCAGCGGCGGCAGCTCCACAAGATGGTGGTGTGCCTCCAGCCCAAGTTTTTCCTCCTGCCACTGGCTGGGACTAG 1149 0.5178 MGLSSAKREMIECKVGEGKESETCRKQNPTRNKNGLKAQINPNFSNSSERAGTQQTPPTPLLPPGAMAAADSSAATSRQLTQRETDIQMMLAADVHLGTKNCDFQMERYVFKRRTDGIYIINLGKTWEKLQLAARIIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQMQQSYNEPRLLILTDPRTDHQPIIEGALGNIPTIAFCDTDSPMRYVDVGIPANNKGKNSIGCLFWLLARMVLQMRGTIRPGHKWDVMVDLFFYREPEEAKQQEEDEAPAGQDYAISDFNAAGIGSFPAADGQWPTAVEQPWTEEASQPIPAVPTNWVPETTAAGDWGEAVAAPATAAAAAPQDGGVPPAQVFPPATGWD 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g0194 382 ProSitePatterns Ribosomal protein S2 signature 2. 191 215 IPR018130 GO:0003735|GO:0005840|GO:0006412
Aed1g0194 382 MobiDBLite consensus disorder prediction 10 27 - -
Aed1g0194 382 MobiDBLite consensus disorder prediction 28 56 - -
Aed1g0194 382 PRINTS Ribosomal protein S2 signature 87 105 IPR001865 GO:0003735|GO:0005840|GO:0006412
Aed1g0194 382 PRINTS Ribosomal protein S2 signature 229 243 IPR001865 GO:0003735|GO:0005840|GO:0006412
Aed1g0194 382 PRINTS Ribosomal protein S2 signature 208 219 IPR001865 GO:0003735|GO:0005840|GO:0006412
Aed1g0194 382 PRINTS Ribosomal protein S2 signature 166 183 IPR001865 GO:0003735|GO:0005840|GO:0006412
Aed1g0194 382 PRINTS Ribosomal protein S2 signature 117 126 IPR001865 GO:0003735|GO:0005840|GO:0006412
Aed1g0194 382 PRINTS Ribosomal protein S2 signature 191 208 IPR001865 GO:0003735|GO:0005840|GO:0006412
Aed1g0194 382 MobiDBLite consensus disorder prediction 1 75 - -
Aed1g0194 382 MobiDBLite consensus disorder prediction 323 342 - -
Aed1g0194 382 PANTHER 40S RIBOSOMAL PROTEIN SA 58 362 IPR005707 GO:0003735|GO:0006412|GO:0015935
Aed1g0194 382 SUPERFAMILY Ribosomal protein S2 83 272 IPR023591 -
Aed1g0194 382 Gene3D - 86 291 - -
Aed1g0194 382 CDD RPS2 90 256 IPR001865 GO:0003735|GO:0005840|GO:0006412
Aed1g0194 382 TIGRFAM uS2_euk_arch: ribosomal protein uS2 83 278 IPR005707 GO:0003735|GO:0006412|GO:0015935
Aed1g0194 382 PANTHER 40S RIBOSOMAL PROTEIN SA 58 362 - -
Aed1g0194 382 MobiDBLite consensus disorder prediction 356 382 - -
Aed1g0194 382 Hamap 40S ribosomal protein SA [rps-0]. 74 327 IPR027498 GO:0003735|GO:0006412|GO:0015935
Aed1g0194 382 Pfam Ribosomal protein S2 90 184 IPR001865 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g0194 Aed-Chr1 3433311 3437409 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g0194 69 357 Cytoplasmic Ribosomal Protein Gene Family AT3G04770 71.478 3.29e-148 419
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g0194 K02998 - gmx:100786575 567.77