Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g0137 ATGCGTATGGAAAACCACCAAAACCACAAGAAGCCAGAAGAAGAACCAGAACCCGACGTAGAGAAGAGCCATCAACAACAACAACAACAACGTAGCGAAGCGTGGGGCACGTGGGAGGAGCTCTTGCTAGCGTGCGCCGTGAACCGCCATGGCTTCAAGGACTGGGACGCCGTCGCCGTCGAGGTCCAGTCGCGCACCACGCGTCTCCTCACCACCGCGCGCCTCTGCGAGCAGAGGTTTCACGATCTCAACCGCCGATTCGCCGACCAATGCAACGACGACGTTGCGCCGCCGCGCCAGAACGGAGGCGTCGCCGCCGTCTCCGATCACGTGCCCTGGCTCGACGAATTGCGGAAGCAACGCGTCGACGAGCTCCGCCGCGAGGTCCAGCGCAGCGACGTTTCCATTCTGTCGTTGCAGTTGGAGGTTAAGAGATTGGAGGACGAGAAAGCGACGGAGAATGACGGAAAAGGCGACGAGAAACCAGATCTGGCGGTTTCCGGCGAGGTGCGGCCGGAAAACGACAAAACCGGCGGAGAAGTTGAGGAGGCAGGGCCGGCGAATTCCGAACCGGAGGAGAGAACCGCGAACAACACAGACAAGACTTTGCCTACAACGGGCGACGAATCGGACCGGGAGAACCAGTCGGTTAACGAGTCCAACTCGACCGGTTCGCGGTTCGACAAAACCGGAGACGGCGACGTGAAGATAAAAACCGGTTCGATTCCGGTTCAGACCGGTTCTCAAGAACCGGATCCGGCTTCGCGTAAGGGAAAACCGGTCGGGGAGGAATCGAATAACGGAAGCTACGATGCGTTGGCGAAGGTGCCAACGTGCGAGGAGTCGGTGCCTCCGAGTGAAGAGAGGAAAGTGGAGGAAGATGATGACGACTCGTCCGAGTTGCACGACTCGGTGGCTCACTCGGGCGAGGGAGCGACGACGAGGGAGAGCAGCGAGGTGCAGAGCTCTGCGAGCTTGACGAGGAAGAGGAAGACGCGGCTGAGGAAGGAAGTTTCCGGCGGAGCCGCCGCATCATCTCCGCCGGAGAACGACGAGGTGGCAACCTTGAAATCAGAACCGTTGGTTGGGGTTTTGGAGTTCATCAAGGGGCAGGAGCACAGCTCATTGTTCGAGCGCCGTCTTGATAGCCAGAAGGATTCGGATAGATACAAAGACATGGTGAAACAGCCCCTGGACTTGGAAACCATACAATTGAGACTCCAAAAGGGTCACTATTCCTCAAGCACCAGTGCATTCTTCCGCGACCTCCTCCTCCTCTTCACCAATGCCGCTGTGTTCTTCCCCTATGACTCCCTGGAATCGCAGGCAGCACGGCAGCTGCACCGCCTTGTCACAGCCGATATGAAGAACCACCGCCACGGCCAGGCGCAATCATCGGATCCTATCATCCCCCAGGGGAAGAACAACAACGATTCACTCCCTCTGAACACTCCGTCAGCGAAACCAGAGTCTCTCTTTTCAAAGAGCAAAGCCTCTGCTGCTGTTCCTATATTGGTGTGCCGCAAACGCAGTTCAATGTCATCCAAGCCTTCAGCCAACCAACAACAACAACAACCCATCTTTAATGACAAGAAGGAAAGGCCATCTTCTGATACAAAGCCAGCCATGAAACTCTCTTCTTCTGATAATTCAGAAGAAGAGGAGCCTCCTCCCAAGGCTAAGGAAAAGCCTGTTGTCACTGGAGCAAGAAGCTTGAGAAGGAGCAACAAGAACCTCAATAATAATAATAATAATAACAACAACAATAAGAAACCATCCTCTAACTCCACTCTTAAGGCTGGTTCCTCGGGGAACAAGCTGTCAGAGACCCTCAAACCGGAGAAGAGCAAGGCAGAGGGAGGCACAGACAAGAAAAGGAATGCAGCTGCAGATTTCTTGAAACGGATTAAGCGAAACACTTCAGCAGAAGCATCGAAGGGTGGCGGCAGTGGTGGTGGCGGAGGAGGAGGAGGAGGAGGAAGTAGCAGCAGCAGCAAGGGTGGTGGTGGAGGTGCCAAAGAGCAGAAGAAAACAGTGAACAATGGAAAGGGTGATAATAAAGGGAAAGAAAGGGCATCAAGGCATAATAACGTTGGAGGTTCTGCGGATAAAAGGAATAGTAATAAGAATACGGAGAACAACAACAACAACTCGAAGAGAAGTGTTGGTAGACCTCCAAAGAAAGCAGCCGCAGCAGAGACAAATGCAGCAGCAGCAGGTTCCGCAAAGCGTGGGAGGGAAAGTAGTAGTGCCAGTGCTGGCAAGGATAAGCGACCCAAGAAACGTTCCAAGAAATGA 2298 0.5431 MRMENHQNHKKPEEEPEPDVEKSHQQQQQQRSEAWGTWEELLLACAVNRHGFKDWDAVAVEVQSRTTRLLTTARLCEQRFHDLNRRFADQCNDDVAPPRQNGGVAAVSDHVPWLDELRKQRVDELRREVQRSDVSILSLQLEVKRLEDEKATENDGKGDEKPDLAVSGEVRPENDKTGGEVEEAGPANSEPEERTANNTDKTLPTTGDESDRENQSVNESNSTGSRFDKTGDGDVKIKTGSIPVQTGSQEPDPASRKGKPVGEESNNGSYDALAKVPTCEESVPPSEERKVEEDDDDSSELHDSVAHSGEGATTRESSEVQSSASLTRKRKTRLRKEVSGGAAASSPPENDEVATLKSEPLVGVLEFIKGQEHSSLFERRLDSQKDSDRYKDMVKQPLDLETIQLRLQKGHYSSSTSAFFRDLLLLFTNAAVFFPYDSLESQAARQLHRLVTADMKNHRHGQAQSSDPIIPQGKNNNDSLPLNTPSAKPESLFSKSKASAAVPILVCRKRSSMSSKPSANQQQQQPIFNDKKERPSSDTKPAMKLSSSDNSEEEEPPPKAKEKPVVTGARSLRRSNKNLNNNNNNNNNNKKPSSNSTLKAGSSGNKLSETLKPEKSKAEGGTDKKRNAAADFLKRIKRNTSAEASKGGGSGGGGGGGGGGSSSSSKGGGGGAKEQKKTVNNGKGDNKGKERASRHNNVGGSADKRNSNKNTENNNNNSKRSVGRPPKKAAAAETNAAAAGSAKRGRESSSASAGKDKRPKKRSKK 765
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g0137 765 MobiDBLite consensus disorder prediction 511 530 - -
Aed1g0137 765 MobiDBLite consensus disorder prediction 678 698 - -
Aed1g0137 765 Coils Coil 569 589 - -
Aed1g0137 765 CDD SANT 34 66 IPR001005 -
Aed1g0137 765 ProSiteProfiles Bromodomain profile. 369 441 IPR001487 GO:0005515
Aed1g0137 765 CDD Bromodomain 364 455 - -
Aed1g0137 765 Pfam Bromodomain 364 445 IPR001487 GO:0005515
Aed1g0137 765 SMART bromo_6 132 460 IPR001487 GO:0005515
Aed1g0137 765 MobiDBLite consensus disorder prediction 148 355 - -
Aed1g0137 765 MobiDBLite consensus disorder prediction 1 26 - -
Aed1g0137 765 MobiDBLite consensus disorder prediction 1 32 - -
Aed1g0137 765 MobiDBLite consensus disorder prediction 458 493 - -
Aed1g0137 765 MobiDBLite consensus disorder prediction 610 641 - -
Aed1g0137 765 MobiDBLite consensus disorder prediction 310 327 - -
Aed1g0137 765 Pfam Myb-like DNA-binding domain 33 66 IPR001005 -
Aed1g0137 765 MobiDBLite consensus disorder prediction 547 561 - -
Aed1g0137 765 MobiDBLite consensus disorder prediction 571 609 - -
Aed1g0137 765 MobiDBLite consensus disorder prediction 457 495 - -
Aed1g0137 765 MobiDBLite consensus disorder prediction 699 722 - -
Aed1g0137 765 MobiDBLite consensus disorder prediction 511 765 - -
Aed1g0137 765 SMART sant 31 86 IPR001005 -
Aed1g0137 765 MobiDBLite consensus disorder prediction 148 180 - -
Aed1g0137 765 SUPERFAMILY Bromodomain 344 458 IPR036427 GO:0005515
Aed1g0137 765 Gene3D - 349 465 IPR036427 GO:0005515
Aed1g0137 765 PANTHER BNAC04G22430D PROTEIN 16 765 - -
Aed1g0137 765 PANTHER BROMODOMAIN-CONTAINING PROTEIN 8 16 765 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g0137 Aed-Chr1 2634886 2641105 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Aed1g0137 Bromodomain 3.2e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g0137 - - gmx:100811021 987.252