Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g0106 ATGCTGCTCCATCTTGGGAGAGTCAAAGTTCTCGTTGTTTCGTCCGCTGATGCCGCGCGTGAGGTAATGAAAACCCACGACCGCGTCTTCTCGGACAGACCGAACATTAAAATATTCGACATTCTTACCTACGGTTCCAAGGATGTTGCTGCGGCGCCGTACGGAGAGCACTGGAGGCAAATGAGGAGCATCGCCGTCTTGCACCTTCTTAGCAACAAAAGGGTTCATTCATTCCGCGCGGTTAGAGAAGAGGAGGTTGAAATAACGATGGAAAACATAAGGCGACACCATTGTAACTCTTCTTCTTCGCCGTCGTTGTTGCCGCAAGTGAATTTAAGTGAAACACTTTCTAGTGTCACTAACAGCATAATTTGTCGGGTTTGTTTGGGGAGAAAATACGGGGGAGAAAGTGGGAGGGATTTTAAGAAGATGTTGATGGAGTTTGTGGAGTTGCTTGGGGCGTTTGCTGTTGGGGACTATGTGCCTTGGCTTGGGTGGTTGAGCAATGTTTCTGGATTATACGGTAGAGCAGAGAGAGTGGCCAAAGATTTTGATGAGTTTTTGGATGAGGTGATTGAAGAGCATACAATTCGTCAGCAAGATGCCAACGAGGATATGGAGCATAGTGACTTTGTGGACGTTTTGCTTCGGATGCAAAGGACAAATACAATTGGCTTTCCCATTGACAAAATCGTCATCAAGGCTATGATACAAGATATGTTTACAGCAGGTACAGATACTACATCGGCCTCTCTAGAGTGGGCAATGACAGAACTCTTAAGACATCCAATTATGATGAAGAAACTACAAGACGAAGGAAGGAGTGTGGCTAGTGACAGAAAGCATATAACTGAAGATGATTTGGGTCACATGCAATACTTAAAGGCAGTAATCAAAGAAACTTTTAGATTACATCCTCCAGTCCCATTACTAATCCAACGAAAAAGCATGCAAGACATTAAATTGAACGGCTATGACCTTAAAGCCGGCACGCGAGTAATGGTCAATGCTTGGGCCATTGCAAGAGATCCAATGATCTGGGATGAACCTGAGGAGTTCAAACCTGAGAGATTCTTAAATAGTTCAATAGATGTTAAAGGAAATGATTTTGAATTGATCCCATTTGGAGCTGGGAGGAGGGGGTGCCCAGGCACAATGTTTGCTATGGTTGTTATTGAGCTTGTTCTAGCCAACCTCGTCCATCAATTTGATTGGGAGTTACCAAGAGGAGATAAGACCTTGGATATGTCTGAATCATTTGGCTTAACCATGCATAGAAAGGGTCCCCTCATGGCGGTTGCAGTGCCAAAAAACAAGTAA 1320 0.4439 MLLHLGRVKVLVVSSADAAREVMKTHDRVFSDRPNIKIFDILTYGSKDVAAAPYGEHWRQMRSIAVLHLLSNKRVHSFRAVREEEVEITMENIRRHHCNSSSSPSLLPQVNLSETLSSVTNSIICRVCLGRKYGGESGRDFKKMLMEFVELLGAFAVGDYVPWLGWLSNVSGLYGRAERVAKDFDEFLDEVIEEHTIRQQDANEDMEHSDFVDVLLRMQRTNTIGFPIDKIVIKAMIQDMFTAGTDTTSASLEWAMTELLRHPIMMKKLQDEGRSVASDRKHITEDDLGHMQYLKAVIKETFRLHPPVPLLIQRKSMQDIKLNGYDLKAGTRVMVNAWAIARDPMIWDEPEEFKPERFLNSSIDVKGNDFELIPFGAGRRGCPGTMFAMVVIELVLANLVHQFDWELPRGDKTLDMSESFGLTMHRKGPLMAVAVPKNK 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g0106 439 PANTHER CYTOCHROME P450 FAMILY PROTEIN 1 437 - -
Aed1g0106 439 Pfam Cytochrome P450 3 429 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed1g0106 439 PANTHER CYTOCHROME P450 71B11-RELATED 1 437 - -
Aed1g0106 439 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 375 384 IPR017972 GO:0005506|GO:0016705
Aed1g0106 439 PRINTS P450 superfamily signature 373 382 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed1g0106 439 PRINTS P450 superfamily signature 382 393 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed1g0106 439 PRINTS P450 superfamily signature 243 260 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed1g0106 439 PRINTS P450 superfamily signature 296 307 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed1g0106 439 SUPERFAMILY Cytochrome P450 2 436 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed1g0106 439 Gene3D Cytochrome P450 1 433 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed1g0106 439 PRINTS E-class P450 group I signature 252 278 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed1g0106 439 PRINTS E-class P450 group I signature 18 39 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed1g0106 439 PRINTS E-class P450 group I signature 232 249 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed1g0106 439 PRINTS E-class P450 group I signature 372 382 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed1g0106 439 PRINTS E-class P450 group I signature 295 313 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed1g0106 439 PRINTS E-class P450 group I signature 382 405 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed1g0106 439 PRINTS E-class P450 group I signature 119 137 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed1g0106 439 PRINTS E-class P450 group I signature 336 360 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g0106 Aed-Chr1 2228712 2230931 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g0106 1 434 Cytochrome P450 AT3G48270 53.089 5.03e-166 474
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g0106 - - mtr:MTR_4g104540 575.859