Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g0105 ATGCTACTCATAATCTTGATCTCCATCTTCCTCATACTCTTTCTTCAAATCCTATGGCATCACTTCAAATATTCAACAAAAGACAAAACCTCACCCCCTTCCCCTCCAAAATTTCCCATAATAGGAAACTTCCACCAACTTGGCTCATATCCTCACCGCACACTCCAATCTTTAGCCCAAAAATATGGCCCCTTGATGCTGCTCCATCTCGGGAGAGTCCCAGTTCTCGTTGTTTCATCCGCTGATGCCGCACGTGAGGTAATGAAAACCCACGACCGCGTCTTCTCAGACCGACCCAATAGTAGAATGTTCGACATCCTCTTATACGGTTCCAAGGACGTTGCCGGGGCACCTTACGGAGAGTACTGGAGGCAGATAAGGAGCATCGCCGTCCTGCACCTTCTCAGCACCAAAAGGGTTCATTCGTTTCGGGCGGTTAGAGAAGAGGAAGTTGAAACAACGATGGACGACATAAGGAACTCTTGTGCTAATTCTTGTTCGATCACTCCGGTTAATATAAGCGAAACACTGTCTACTATCACCAACAACATAGTTTGTCGGGTTGCTCTGGGGAGAAAGCACGACGGAGAGAGTGGGAGGGGGTTCAAGAAGTTGTTGATGGAGTTTACGGAGTTGCTTGGGACTTTTGTTGTTGGGGACTATGTTCCTTGGCTTAGTTGGTTGAGCAGTGTTTATGGAGTGTATGGTAGAGCAAAGAGAGTGGCCAAAGATTTTGATGAGTTTTTAGATGAGGTGATTGAAGAGCATATAAATAGTCACAAAGGAGTCAATGAAGAGGAGCATAGTGATTTTGTGGATGTTTTGCTTTGGATACAAAGAACAAATGCAGTTGGTTTTCCCATCGACAGAACCATCATCAAGGCTTTGATTTTGTGGGCAATGAGAGAACTCTTAAGACATCCAACTGTGATGAAGAAACTACAAGACGAAATTAGGAGTGTGGTTGGTGATCATAGAAAGCATGTAACCGAAGAGGATTTGGGTCGCATACAATACTTAAAGGCAGTGATTAAAGAAACTTTTCGCTTACATCCTCCAATTCCATTACTTGTTCCTCGACAAAGCATACAAGACACCGAATTGAACCATTACCATGTTAAAGCTGGCACGCGAGTAATTATCAATGCTTGGGTCATTGCAAGAGATCCCATGAATTGGGATGAACCTGAGGAGTTCAAACCTGAGAGGTTTTTAAATAGTTCAATAGATGTTAAAGGGAATGATTTTCAATTGATTCCATTTGGAGCAGGGAGAAGGGGGTGTCCAGGAACAATGTTTGCTACTGTTGTTAATGAGCTTGTTCTAGCCAACCTTGTTCATCAATTTGATTGGATGGAGGCAAGACTTTGGATATGTCCGAAACAGTTGGCTTAA 1395 0.4351 MLLIILISIFLILFLQILWHHFKYSTKDKTSPPSPPKFPIIGNFHQLGSYPHRTLQSLAQKYGPLMLLHLGRVPVLVVSSADAAREVMKTHDRVFSDRPNSRMFDILLYGSKDVAGAPYGEYWRQIRSIAVLHLLSTKRVHSFRAVREEEVETTMDDIRNSCANSCSITPVNISETLSTITNNIVCRVALGRKHDGESGRGFKKLLMEFTELLGTFVVGDYVPWLSWLSSVYGVYGRAKRVAKDFDEFLDEVIEEHINSHKGVNEEEHSDFVDVLLWIQRTNAVGFPIDRTIIKALILWAMRELLRHPTVMKKLQDEIRSVVGDHRKHVTEEDLGRIQYLKAVIKETFRLHPPIPLLVPRQSIQDTELNHYHVKAGTRVIINAWVIARDPMNWDEPEEFKPERFLNSSIDVKGNDFQLIPFGAGRRGCPGTMFATVVNELVLANLVHQFDWMEARLWICPKQLA 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g0105 464 PRINTS E-class P450 group I signature 297 323 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed1g0105 464 PRINTS E-class P450 group I signature 428 451 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed1g0105 464 PRINTS E-class P450 group I signature 83 104 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed1g0105 464 PRINTS E-class P450 group I signature 418 428 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed1g0105 464 PRINTS E-class P450 group I signature 59 78 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed1g0105 464 PRINTS E-class P450 group I signature 341 359 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed1g0105 464 PRINTS E-class P450 group I signature 180 198 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed1g0105 464 PRINTS E-class P450 group I signature 382 406 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed1g0105 464 PANTHER CYTOCHROME P450 71B11-RELATED 5 451 - -
Aed1g0105 464 Pfam Cytochrome P450 297 452 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed1g0105 464 Pfam Cytochrome P450 32 279 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed1g0105 464 PANTHER CYTOCHROME P450 FAMILY PROTEIN 5 451 - -
Aed1g0105 464 PRINTS P450 superfamily signature 419 428 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed1g0105 464 PRINTS P450 superfamily signature 306 319 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed1g0105 464 PRINTS P450 superfamily signature 342 353 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed1g0105 464 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 421 430 IPR017972 GO:0005506|GO:0016705
Aed1g0105 464 SUPERFAMILY Cytochrome P450 32 452 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed1g0105 464 Gene3D Cytochrome P450 19 458 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g0105 Aed-Chr1 2211124 2215692 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g0105 27 451 Cytochrome P450 AT3G48270 52.608 3.75e-170 486
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g0105 - - gmx:100806940 567