Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g0102 ATGGTGTATTCAAATTTTGTTTTTTCTCCAGCATGTAGGTTGGTGGCACCAACCATTGTGAAGGGTGATGATTGCGAGGCAGTTCATATTCCTAACCACAAGCTTATGGTAAATGTTGTGAGAAATCTGACCCAGAGATCTCATTGGCGTATCAAGGATTACATTGCCATCAGTCAGTTGGATGTTAACAAAATTAATAATATTGTAGCTGATATGCGCAAGGTTTTGTCTAAAAATTCCCAAGTAGAGCAGCAAAAATTACACAGAAGGGTCCTTTTGGAGAATGTCGATCATGAAAATCAGGCTCTTATGTTTAGTATATTAATATCTTGCTTTGTGAAAACTTCTCATTTTGAAGAGTGCCTTTGTGTTAAGGTAAAATGA 384 0.3672 MVYSNFVFSPACRLVAPTIVKGDDCEAVHIPNHKLMVNVVRNLTQRSHWRIKDYIAISQLDVNKINNIVADMRKVLSKNSQVEQQKLHRRVLLENVDHENQALMFSILISCFVKTSHFEECLCVKVK 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g0102 127 Pfam Mechanosensitive ion channel 19 120 IPR006685 GO:0016020|GO:0055085
Aed1g0102 127 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 2, CHLOROPLASTIC 16 125 - -
Aed1g0102 127 PANTHER OW CONDUCTANCE MECHANOSENSITIVE CHANNEL 16 125 IPR045042 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g0102 Aed-Chr1 2174406 2175043 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g0102 16 125 Mechanosensitive Ion Channel Family AT1G58200 75.455 7.49e-55 179
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g0102 K22047 - gmx:100796022 184.111