Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g0101 ATGTGTCCCTCGCTGGCTCGCTCGCATTGTCTCCCTCACTTGTGCTTCTCGCCTGGCTTAGCTCGAGTCATCTCCCTCACTCACGCTTCTTGCCTGGATCACATTATCCCCCTCACTCACGCTTCTCGCCAGGCTTGCTTGCGTTTGCTCCTTTGCTTGCACTACTCGCTGGAAGCTTGGGCTCCCGCGCGCCGCAACCGCGCAAGCAGGAAGGAGCAGCTGGAGTTTGTGGAAAAGCAGAGGCTGGAATACGAAGCCATTCAGAATCAGCTCAAAGAACAGCAGAAGCGTCTTCAAGAAATCAAAGGGTCAACGACAGAGAATAATAGTAACAAGTTATTCTCGTGCTGGTGGAACCTTCCCACTGAGGATATGGGTTTGGAGGATGCTGAACTGTTCAAGACTTCTTTGGAACGTTTGAAGTTTAACCTCGTTGGGGCGCTGCAAGAGAAGCAGATGAATAATTCATCAACATCAACAATGATAATGCAACATCCTCCTCCTTCCATGGTTATTCCACCGCCAATGCCATATACTATGGTTCCACCGCAACAACAGTTTTCAAACATGCCGCTGCTTGATTTCAGTGGAGGGAGTGGGACTCCACTCATGAAATCTGCTAGTGTTATTTTAACAAGGTCATATGAGGCTCTACAAGGAAACCCTATTTTGCTTAGATTGATCCTAGCCATTGGTATCATTGCCTTTGCTGTTTGTGGTCTTGAGCCACTCCTTCGTCTCAGCAGGGTTTTGTTCCTTCAGAGTACGGACTGTAGTTGGAAGAAAAGTAGTTCGCGATATATTCTGGCATCTTATTTTCAGCCATTGCTGTTGTGGACTGGGGCAATGCTCGTATGCAGAATTATTTGTTTAAGAGCATTAGATCCACTAGTCCTACCATCTGAGTCCAGCCAGGTTGTGAAGCAGCGGTTGCTGAATTTTGTGAGATCTTTGTCAACAGTGATTTCATTTGCATACTGTTTATCAAGGTATTGA 996 0.4689 MCPSLARSHCLPHLCFSPGLARVISLTHASCLDHIIPLTHASRQACLRLLLCLHYSLEAWAPARRNRASRKEQLEFVEKQRLEYEAIQNQLKEQQKRLQEIKGSTTENNSNKLFSCWWNLPTEDMGLEDAELFKTSLERLKFNLVGALQEKQMNNSSTSTMIMQHPPPSMVIPPPMPYTMVPPQQQFSNMPLLDFSGGSGTPLMKSASVILTRSYEALQGNPILLRLILAIGIIAFAVCGLEPLLRLSRVLFLQSTDCSWKKSSSRYILASYFQPLLLWTGAMLVCRIICLRALDPLVLPSESSQVVKQRLLNFVRSLSTVISFAYCLSRY 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g0101 331 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 2, CHLOROPLASTIC 185 329 - -
Aed1g0101 331 Coils Coil 74 104 - -
Aed1g0101 331 PANTHER OW CONDUCTANCE MECHANOSENSITIVE CHANNEL 185 329 IPR045042 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g0101 Aed-Chr1 2156641 2160882 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g0101 198 329 Mechanosensitive Ion Channel Family AT1G58200 56.391 1.15e-41 152
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g0101 K22047 - gmx:100796022 223.016