Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g0086 ATGTTTGATACGCGTCTCTATGAGGCCCATATTCCATTGCCATTACCGACCTCACAACACATCGATCCATCTTCAAATCCTCCTCGCCTCTCTCTCGTCCCTCTTCGCCCTCTCTCTCTCACATCACAATTCTTCGAACCTTTGATTTCTTTGAAAACTGAGAAAGAAGAAACCGAATTTAAGGTACCTGAAACGATTACGCTTTGCGTTAACAACTGCGGCGTCACTGGAAACGCTGCCACGAATAACATGTGTCAGAAGTGCTTCACGGCCTTTACCACCGCCACCACGTCCGGAGGAGTCGGAATCGCGTCTCCGGTGGCCAGATCCGGCGTCTCCGCGCGTCCTCAGAAGAGATCTTTCCCCGAGGAGCCTTCGCCGGCGGCGGATCCTCCGTGCTCTGACCAGACGACACCGTCCGAGGCGAAGCGCGTGGTGAACCGCTGCTCCGGCTGCCGGCGGAAGGTCGGACTCACCGGATTCCGATGCCGCTGCGGCGAGCTCTTCTGCGCTGAGCACCGGTACTCCGACCGCCACGACTGCAGCTACGACTACAAATCCGCCGGAAGAGAAGTCATCGCGAGAGAGAATCCGGTGATCAGAGCCGCGAAGATCGTCAAAGTCTGA 627 0.5662 MFDTRLYEAHIPLPLPTSQHIDPSSNPPRLSLVPLRPLSLTSQFFEPLISLKTEKEETEFKVPETITLCVNNCGVTGNAATNNMCQKCFTAFTTATTSGGVGIASPVARSGVSARPQKRSFPEEPSPAADPPCSDQTTPSEAKRVVNRCSGCRRKVGLTGFRCRCGELFCAEHRYSDRHDCSYDYKSAGREVIARENPVIRAAKIVKV 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g0086 208 SUPERFAMILY AN1-like Zinc finger 135 202 IPR035896 -
Aed1g0086 208 SMART AN1_Zf_4 149 186 IPR000058 GO:0008270
Aed1g0086 208 MobiDBLite consensus disorder prediction 108 139 - -
Aed1g0086 208 Gene3D - 125 204 IPR035896 -
Aed1g0086 208 ProSiteProfiles Zinc finger AN1-type profile. 143 189 IPR000058 GO:0008270
Aed1g0086 208 PANTHER ZINC FINGER A20 AND AN1 DOMAIN-CONTAINING STRESS-ASSOCIATED PROTEIN 5 53 208 - -
Aed1g0086 208 PANTHER AN1-TYPE ZINC FINGER PROTEIN 53 208 - -
Aed1g0086 208 Pfam AN1-like Zinc finger 149 186 IPR000058 GO:0008270
Aed1g0086 208 SMART A20_3 66 90 IPR002653 GO:0003677|GO:0008270
Aed1g0086 208 Pfam A20-like zinc finger 68 89 IPR002653 GO:0003677|GO:0008270
Aed1g0086 208 ProSiteProfiles Zinc finger A20-type profile. 63 97 IPR002653 GO:0003677|GO:0008270
Aed1g0086 208 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 68 100 - -
Aed1g0086 208 Gene3D - 53 118 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g0086 Aed-Chr1 1935216 1935982 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g0086 56 208 C2H2 Transcription Factor Family AT3G52800 39.286 4.79e-33 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g0086 - - gmx:100815476 280.411