Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g0075 ATGCCCCTCTATTCCCACCACTCTCAATCAAACCTATTATTCTCTTCTTCATCATACCCTCTTAACAATATTCAATCATCTGAAACAATCTCTTCTTCCTCTTATTGTGCTCCTCCTTCTCCTCCTCTCAGAGAAGCCCTTCCTCTCATCAACAACATAAGCCTCACAAAAAAACAGAAGGAGAAAAATGATGATGAACACTCAAAAAATGATGAAGAAGAAGTTGAAGAGGAAACTAAGAAAAGGGATATGATGGATAATCATGAGACCCTTTTGGATAACACTGGATTAGATGGTGGTGGTGACGACGACGATGACGAAACTGTGACGGTGGCACTTCAAATAGGGCTTCCTAGCTTGGCTTCTGCTTCCTCTTCTGATCATCTTCATAGATCAAGGAAGAAGATGATCTCATCACAAATGGGTGAAAAAGGGGATGTGAGTGTGATTTCTGGACACCCTTTGGATCATAGATTGAAGAACAAGGTTCAGTATTGGATTCCAACCCCTTCTCAGATTCTCATTGGCCCTACTCAGTTTCTGTGTTCTGTCTGCTCTAAGAGCTTCAACAGATATAATAATCTTCAGCACAACATAGATCACCCAAGAGCAAGGTCTCTCAAGGATTTTAGAACCCTTCAAACACATTACAAGAGAAAACATGGCATTAAACCCTACATGTGTAGAAAATGTGACAAAACCTTTGCTGTGAAAGGTGATTGGAGGACACATGAGAAGAACTGTGGCAAAATTTGGTACTGTTTATGTGGATCTGATTTCAAACACAAGAGATCTCTAAAAGATCACATAAAGGCCTTTGGCCATGGCCATGGAGCTGTTGATCATGACATTGATTATTGCATGCAAGAAGATGAAGCGGCTTCTGAAATTGAACATGGTGATGAGGATTGCTCAATGTGA 921 0.4061 MPLYSHHSQSNLLFSSSSYPLNNIQSSETISSSSYCAPPSPPLREALPLINNISLTKKQKEKNDDEHSKNDEEEVEEETKKRDMMDNHETLLDNTGLDGGGDDDDDETVTVALQIGLPSLASASSSDHLHRSRKKMISSQMGEKGDVSVISGHPLDHRLKNKVQYWIPTPSQILIGPTQFLCSVCSKSFNRYNNLQHNIDHPRARSLKDFRTLQTHYKRKHGIKPYMCRKCDKTFAVKGDWRTHEKNCGKIWYCLCGSDFKHKRSLKDHIKAFGHGHGAVDHDIDYCMQEDEAASEIEHGDEDCSM 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g0075 306 PANTHER ZINC FINGER PROTEIN WIP2 196 301 - -
Aed1g0075 306 MobiDBLite consensus disorder prediction 55 107 - -
Aed1g0075 306 SUPERFAMILY beta-beta-alpha zinc fingers 177 246 IPR036236 -
Aed1g0075 306 MobiDBLite consensus disorder prediction 57 89 - -
Aed1g0075 306 PANTHER ZINC FINGER PROTEIN WIP2 196 301 IPR043584 GO:0003700|GO:0010468
Aed1g0075 306 PANTHER ZINC FINGER PROTEIN WIP2 15 196 IPR043584 GO:0003700|GO:0010468
Aed1g0075 306 Gene3D Classic Zinc Finger 171 251 - -
Aed1g0075 306 PANTHER ZINC FINGER PROTEIN WIP2 15 196 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g0075 Aed-Chr1 1732520 1735150 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g0075 109 303 C2H2 Transcription Factor Family AT3G57670 51.550 2.08e-74 231
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Aed1g0075 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g0075 - - gmx:100818131 362.844