Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g0052 ATGGCACTGTGCAACCGCGTCAGATCGGGAATCTCTCTCGTCACCAAATCAGCGTCCCTCACTTCCCAGCGATCCCTCGTCGCCCCTTCCATTTCCCTCGGCTCCAGAAATTACGCCAACGTGCCGGGGCAAAAGGATAACAAAGTTAAGGTCCCTCTGGCTTTGTTTGGAGGTTCAGGAAACTATGCCTCTGCTTTGTACATTGCATCTGTGAAAGCTAGTTCAGTGGAAAAGGTTGAGTCTGAACTTCTGCAATTTGTTGAGGCCGTAAAGAATAGTGCCATATTTTCACAGTTTATAAAGGACATTTCTGTGGCTAAGGATGTTAGAGTAAATGCCATCCAGGATATCTGTGGTGCTGCTAAGTTTTCAGACGTTACAAAGAACTTCCTTGTTATTGTTGCTGAGAATGGAAGGCTTAAAAACATACACACCATTGCAAAGAGGTTTAGAGAGTTGGCAATGGCATACAAGGGAGAAGTGAAAGCGACTGTCACCACCGTTGTTCCTCTTCCCGCCGAAGAGGAAAAGGCATTGAAGGAGACTCTTCAGGAAATAATAGGTTCTGGAGCAAAGGTTTATCTTGAACAGAAGATTGATCCAAGCATACTTGGTGGTATTGTGCTTGAATTTAGCCAGAAGGTCTTTGACATGTCTATTAGGACCAGGGCACAACAGATGGAGAGGATCCTCCGCGAGCCCATATCGATTTCCAACCTCTAG 723 0.4578 MALCNRVRSGISLVTKSASLTSQRSLVAPSISLGSRNYANVPGQKDNKVKVPLALFGGSGNYASALYIASVKASSVEKVESELLQFVEAVKNSAIFSQFIKDISVAKDVRVNAIQDICGAAKFSDVTKNFLVIVAENGRLKNIHTIAKRFRELAMAYKGEVKATVTTVVPLPAEEEKALKETLQEIIGSGAKVYLEQKIDPSILGGIVLEFSQKVFDMSIRTRAQQMERILREPISISNL 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g0052 240 ProSitePatterns ATP synthase delta (OSCP) subunit signature. 193 212 IPR020781 GO:0015986|GO:0016020|GO:0046933
Aed1g0052 240 SUPERFAMILY N-terminal domain of the delta subunit of the F1F0-ATP synthase 59 159 IPR026015 -
Aed1g0052 240 TIGRFAM ATP_synt_delta: ATP synthase F1, delta subunit 61 231 IPR000711 GO:0015986|GO:0046933
Aed1g0052 240 Gene3D - 58 151 IPR026015 -
Aed1g0052 240 Pfam ATP synthase delta (OSCP) subunit 60 231 IPR000711 GO:0015986|GO:0046933
Aed1g0052 240 PRINTS ATP synthase delta subunit signature 206 224 IPR000711 GO:0015986|GO:0046933
Aed1g0052 240 PRINTS ATP synthase delta subunit signature 139 153 IPR000711 GO:0015986|GO:0046933
Aed1g0052 240 PRINTS ATP synthase delta subunit signature 128 139 IPR000711 GO:0015986|GO:0046933
Aed1g0052 240 PRINTS ATP synthase delta subunit signature 191 206 IPR000711 GO:0015986|GO:0046933
Aed1g0052 240 PRINTS ATP synthase delta subunit signature 58 77 IPR000711 GO:0015986|GO:0046933
Aed1g0052 240 PANTHER ATP SYNTHASE SUBUNIT O, MITOCHONDRIAL 24 233 - -
Aed1g0052 240 Hamap ATP synthase subunit delta [atpD]. 54 233 IPR000711 GO:0015986|GO:0046933
Aed1g0052 240 PANTHER ATP SYNTHASE DELTA CHAIN 24 233 IPR000711 GO:0015986|GO:0046933
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g0052 98 240 Primary Pumps ATPases AT5G13450 61.538 1.56e-62 192
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g0052 K02137 - gmx:100790990 390.963