Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g0039 ATGGATTTTATTTGGTCAGGTGCTTCTGCAATTGGTAAATGGTTGGTTGGATCCATTCCAAGTGAACTTGGTTACATACTATCCTATGAGAAGAACCTTAAAGAGCTTGAAACAGAGGTTCAAATGCTGGAAGGTACTCAACTCAGTGTGCAACACCGTGTTGAAGAGGCTATAAAGAATGGAGAAAAGATTGAAGATGTTGTACAAAACTGGCAGAAGGAAGCAAATGGCATTGTTGATGTGGCAAAGAAACTTATTGACACTGAAGTAGGATATTGTTTGGGACATTGTCCCAATCTGTGGACAAGAAACCGGCTTAGTAGAGGATTTGAAGAAATGACACAAAACATATCTAGAATCAAAGATAATGGAAGATTTGAGAGGATTTCTTACCGTGTTCCTTCCGAGGTTACAATTTCGCCATTTTGTAGAGGTTATCAAGCACTGGTCTCTGGAACATCAATTTTGAATGAGATTAAGGAAATATTGAAGGATCCTAAAATGTACATGATTGGGGTATATGGGATGGGTGGCGTGGGTAAAACTACATTGGTGAATCAATTAGCTTGGGAAGTAAAAGAAGATGGATTATTTGGTACTGTAGTTATTGCTGATATAACCAATCCTCAAAATGTCAACAACATTCAAGGTCAAATTGCTGAAGCGTTGGATCTAAAGTTTGACAAGGAGACAAAAAGAGGAAGAGCAACAGAACTGCGTCAAAGGATAAAACAAGAGAAGAGTGTTCTCATTATTCTTGATAACATTTGGAGCGAACTTGATTTTGTAGAAGTTGGGATTCCTTTTGGTGATGAACACAATGGTTGCAATGTAGTGGTGACTTCTAGAGATCTTAATGTGCTGAAAAGGATGGGAACTCAAAAAGAAATTTATATCAGAACTTTATTGGAGGAGGATAGTTGGATTTTGTTCAAGAAAATGGCAGGTGATGTTGTTGAAGAAGTCCAGATAAAACCAATTGCAGAAAAAATGTTCAAATGTTGTGCCGGTTTGCCCCTTTTGATCAAGGTTGTGGCAACAAATTTGAGAAAAAAAGATGTCCCTACTTGGAGGGATGCCTTAAGACAACTGGAGAGACTTGAGCATGAACAGTTGCATAACAAAGTCTACCCTACCTTGGAGTTAAGTTATAATTATTTAGAGGATGAGCTAAAGTCAGTATTCTTATTCATTGGTTCATTTGGCCAAAATAAGATTCGCACTGAAGAATTGTTTTCATATTGTTGGGGATTGGGCTTTTATGAGCGCATGCATACATTGACAGAGGCAAGAGACAGGCATCACAAATTGATCAGTGACCTTAGGGACTCTTCAATGTTGCTTGAAAGAGAACTTGAATATGTTAGAGTGCATGATGTTGTGCTTGATGTGGCCAAATCAATTGCATCTAACATTCATCCAATCTATGCAGTTGAGAGGAAAACTAAATTGGAAGAGTGGCCAAGTGTAGATCACCTTAAAACATTTCATTATATTATTGTTCCTTCGTCTTTCATTGTTGGATTTCCAGAGAACTTGGAGTGCCCAGAGTTGAAGCTCCTTGTACTTAAACATATGGGCAATTACCATTTAGAAGTCCCTGATAACTTTTTCTCTGGAATGAGAGAAGTGAGGGTTTTGATTTTACATGGATTGATGTTTACTACTTCTCCAGATTTTAATCTCTTAATAAACCTTCATTCATTGAGTCTATGTAGTTGTAGTTTAAAAGACATAAGTATGGTTGCAAAACTCACAAATTTAGAATTTCTCAGCTTGAAAGACTCTAGTGTTGAAGAGCCAATTCCAACACATTCTTTTGCAAAGCTTAAAGTTATTAGAGTTGAACGTTGTCACAAGTTGATTAATCTACTTTTGTATTCCCCTGGAAGAAACATTTTTCATCAACTGCATGAGATGGAGATTTCTTATTGTGGAAATCTGGAAAATATCATATCAATGGAAAAACAAAAGGATGAGAACGAACTTCTCAATATTGTTCTCCCTGAATTGCATTCTCTCACGTTAAGTGAATTACCTAAGCTTATGAGTTTCTATGTGCCATTAACAGTTGATAATAGCATTCCTCTGGCAGTGTATAACCAACAGGTGACTAGAGCAATGGTCAAACTACAACATCTTACAATTGATCGCTGCTCTTTGCCGGAAGAGATATTTGTCCAAGAAAAACAGGTTCAATTTCCCAACTTGGAGACACTGCATATCAGTTTCCTGTATAGTTTGAAGTCAATATGGCCATATCAAGTGGCTATGAATTCTTTTTGCAAGTTGAGGAGAATTTACATTGGAGGCTGTAAAAGTTTGGTCGATTATGTCTTTCCCATATCTGTGGCTAAAGAGCTTCAGCAACTCCAAAATCTTCATATAAGCCAGTGTGGCATAACAAGTATTGTTGAAAAAAGTGATAGTATTTGTGATATGACGCTTGTTTACCTTGAAATATATGATTGTCAAAATATGAAGACCATAGTCTCACCCACTGTGCTATTTAAGTCTTTAGAGGCATTGTATGTGGAAAGTTGTGATGGAGTGGTAAATATTATAACGCCTTCAACAATCACAAGTTTACCAAAACTTCGCATTTTAAGAATAAGCCATTGTTATAAGCTAGAGGAAATTTGGGAAAGCAGTAACGAGGGTGATGCACCATCGGCGACACCGGATTCGATACTGCAGTTTGAAGACTTCCAGGTGGTTGGTCAATTGTTTTCTTAG 2736 0.3721 MDFIWSGASAIGKWLVGSIPSELGYILSYEKNLKELETEVQMLEGTQLSVQHRVEEAIKNGEKIEDVVQNWQKEANGIVDVAKKLIDTEVGYCLGHCPNLWTRNRLSRGFEEMTQNISRIKDNGRFERISYRVPSEVTISPFCRGYQALVSGTSILNEIKEILKDPKMYMIGVYGMGGVGKTTLVNQLAWEVKEDGLFGTVVIADITNPQNVNNIQGQIAEALDLKFDKETKRGRATELRQRIKQEKSVLIILDNIWSELDFVEVGIPFGDEHNGCNVVVTSRDLNVLKRMGTQKEIYIRTLLEEDSWILFKKMAGDVVEEVQIKPIAEKMFKCCAGLPLLIKVVATNLRKKDVPTWRDALRQLERLEHEQLHNKVYPTLELSYNYLEDELKSVFLFIGSFGQNKIRTEELFSYCWGLGFYERMHTLTEARDRHHKLISDLRDSSMLLERELEYVRVHDVVLDVAKSIASNIHPIYAVERKTKLEEWPSVDHLKTFHYIIVPSSFIVGFPENLECPELKLLVLKHMGNYHLEVPDNFFSGMREVRVLILHGLMFTTSPDFNLLINLHSLSLCSCSLKDISMVAKLTNLEFLSLKDSSVEEPIPTHSFAKLKVIRVERCHKLINLLLYSPGRNIFHQLHEMEISYCGNLENIISMEKQKDENELLNIVLPELHSLTLSELPKLMSFYVPLTVDNSIPLAVYNQQVTRAMVKLQHLTIDRCSLPEEIFVQEKQVQFPNLETLHISFLYSLKSIWPYQVAMNSFCKLRRIYIGGCKSLVDYVFPISVAKELQQLQNLHISQCGITSIVEKSDSICDMTLVYLEIYDCQNMKTIVSPTVLFKSLEALYVESCDGVVNIITPSTITSLPKLRILRISHCYKLEEIWESSNEGDAPSATPDSILQFEDFQVVGQLFS 911
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g0039 911 PANTHER - 612 806 - -
Aed1g0039 911 Gene3D - 139 300 IPR027417 -
Aed1g0039 911 Gene3D Ribonuclease Inhibitor 733 891 IPR032675 -
Aed1g0039 911 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 153 398 IPR027417 -
Aed1g0039 911 PRINTS Disease resistance protein signature 243 257 - -
Aed1g0039 911 PRINTS Disease resistance protein signature 335 349 - -
Aed1g0039 911 PRINTS Disease resistance protein signature 861 877 - -
Aed1g0039 911 PRINTS Disease resistance protein signature 170 185 - -
Aed1g0039 911 Gene3D - 301 383 IPR042197 -
Aed1g0039 911 Pfam NB-ARC domain 157 385 IPR002182 GO:0043531
Aed1g0039 911 CDD AAA 155 300 - -
Aed1g0039 911 SUPERFAMILY L domain-like 456 881 - -
Aed1g0039 911 SMART AAA_5 167 303 IPR003593 -
Aed1g0039 911 Gene3D - 384 468 IPR036388 -
Aed1g0039 911 Coils Coil 54 74 - -
Aed1g0039 911 Coils Coil 26 46 - -
Aed1g0039 911 Gene3D Ribonuclease Inhibitor 478 675 IPR032675 -
Aed1g0039 911 PANTHER PHOSPHATASE, PUTATIVE-RELATED 612 806 - -
Aed1g0039 911 PANTHER PHOSPHATASE, PUTATIVE-RELATED 8 621 - -
Aed1g0039 911 PANTHER - 8 621 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g0039 Aed-Chr1 1124520 1132967 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g0039 160 441 WRKY Transcription Factor Family AT5G45050 26.885 7.23e-09 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g0039 - - gmx:100781555 723.776