Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g0024 ATGGAAGCCGTAGTGCTCGATCCCGGTTCCAGCCTCCTCAAAGCCGGTTTCGCAATTCCCGATCAAGCTCCCGCAATGATGAAACGAATGCTCGATGATGGGTCAATGACTACTGATGACGTTGTTGCCGTTGATCCGGTGTGCCGAGGTTATGTCAGAGATTGGGATGCCATGGAGGATTTGCTGCATTATGTGTTGTATACTGGCCTTGGATGGGAAATGGGCAATGAAGGACAGATACTGTTCACAGATCCACTTTGTACTCCAAAGGCTAACAAGGAACAGTTAGTGCAACTAATGTTTGAATCATTCAACATATCAGGGTTTTATGCCTCTGAACAAGCAGTGTTGTCACTATATGCTGTAGGACGTATCTCTGGATGCACAGTTGATATTGGTCATGGAAAAATAGATATTGCACCAGTGATTGAGGGTGCTGTTAACCACATTGCCTCAAGAAGATTTGAGTTTGGAGGTATTGATCTAACTAATTTCCTGGCTCAAGAACTTAGCAAATCCAATCCGCTAGTGAATATCAGCATCTCTGATGTTGAGAAAATAAAACAGCAATACTCGTGTTGTGCTGAAGATGAATTAGCTTATCAGAAGACCCAAAATTGTCGCCCTGTGATTTCAATTGGAAGAGAAAAATATACTGTTGGCGAAGCTTTATTCCAGCCATGTCTATTGGGTTTGGACGCTCATGGCATTGTTGAGCAGCTTGTCCGTACTATTTCAACGGTGTCATCTGATAATCATAGGCAACTTCTTGAAAATACCGTGGTTTGTGGTGGCTCTTCTTCAATGATTGGTTTTGAAGAGAGATTTCAGAAGGAATCTAGCCTAAGTTCATCTGCTATTAGACCTACCCTAGTAAAGCCTCCAGAATACATGCCAGAAAATTTAACCATGTATTCTGCATGGGTGGGAGGTGCCATACTTGCCAAAGTAGTTTTTCCTCAAAATCAGCATGTAACCAAGGCAGACTATGATGAAACGGGGCCTTCCGTTGTTCACCGGAAATGCTTTTGA 1032 0.4302 MEAVVLDPGSSLLKAGFAIPDQAPAMMKRMLDDGSMTTDDVVAVDPVCRGYVRDWDAMEDLLHYVLYTGLGWEMGNEGQILFTDPLCTPKANKEQLVQLMFESFNISGFYASEQAVLSLYAVGRISGCTVDIGHGKIDIAPVIEGAVNHIASRRFEFGGIDLTNFLAQELSKSNPLVNISISDVEKIKQQYSCCAEDELAYQKTQNCRPVISIGREKYTVGEALFQPCLLGLDAHGIVEQLVRTISTVSSDNHRQLLENTVVCGGSSSMIGFEERFQKESSLSSSAIRPTLVKPPEYMPENLTMYSAWVGGAILAKVVFPQNQHVTKADYDETGPSVVHRKCF 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g0024 343 Gene3D - 115 314 - -
Aed1g0024 343 PRINTS Actin signature 37 59 IPR004000 -
Aed1g0024 343 PRINTS Actin signature 117 136 IPR004000 -
Aed1g0024 343 PRINTS Actin signature 92 105 IPR004000 -
Aed1g0024 343 PANTHER BNACNNG31150D PROTEIN 1 342 - -
Aed1g0024 343 SUPERFAMILY Actin-like ATPase domain 123 343 IPR043129 -
Aed1g0024 343 SUPERFAMILY Actin-like ATPase domain 2 130 IPR043129 -
Aed1g0024 343 CDD NBD_sugar-kinase_HSP70_actin 4 177 - -
Aed1g0024 343 PANTHER ACTIN 1 342 IPR004000 -
Aed1g0024 343 Gene3D Actin; Chain A, domain 4 165 242 - -
Aed1g0024 343 Pfam Actin 2 343 IPR004000 -
Aed1g0024 343 SMART actin_3 1 343 IPR004000 -
Aed1g0024 343 Gene3D - 4 337 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g0024 Aed-Chr1 733224 751514 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g0024 1 343 Cytoskeleton Gene Families AT5G09810 34.127 1.47e-60 197
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g0024 K16615 - gmx:100794153 634.409