Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g0016 ATGGCTTTCGGGTTGCCAATGAAGACCATGGAGCCAAGTGTGTGTGGAGATAAGTTAGGTAACCTCATATTTGAAGTAGCTAAAAACTTCGTTTTATACATGGGGATGGTGATTGCGTGCAATGGTTTACATTTTCTTCTAAAGCCTTATAAACAACCTCGCATTACTTCAGACATAATTGTAGGACTAATCGTGGGAAATATAGGAATCGTACGCAAGGTGTTTGAGAAATTCAACTCAACCTTTATATATATCATTGATTTCGGAATGACATGTTACATGTTCGCACTGGGGCTAGAGATGGATCCATACGTGCTCTTCGCAAGACCAAACAGGTACACCAAGGTGGCTCTTGGAGGAGTTCTATGCACGTTCATCATCACATGCATCTCGACGCCGGCGATCCGGTTCTTCCCGGGCGAGTACCGGCTAGTCGAGCTCACCGTTGCCCTCGCCGCGCTGGTGTCTGGCACCAACTCGCCCGTCCTGACGCGGCTGATAACTCAACATAAAATCGGAAAGTCGGACATCGGCAAGATCGTCATCGCGGCGGGAATGCACTCGGACTTCATGTGCTGCATGATCATCTGTATCGGCTACATCATCATGCCGCTGCCGCACTTCTGCCACCACTTGGAGAACAGAATCGACATCAAGAAGTCGCTGAAGATGTTCTGCGCTGTGGTGGTGCAGATTGGCTTCACTGCAATGGTGTCGCCAATGGTGATGAAGTGGGTTAGCAGTGAGAACCCTGAGGGGAAGCCAATGAAGGGTCCACACTTGGTGCTATCAATAGCATTCATGGTGTTGATGTGTGCATCAACGACTATGTATTACTATAACCCTATTTTGAGTGCTTTTTTGGTGGGACTTTGTGTTCCTAGGGAGGGTAGAGTTTCCAAATGGGTTATCACCAAAATCAACTATTTGATGACCACCATTTTTTTCCCTATCTTTTTCTTGTGGATGGGGTATGAGGCTGATTTCAGGCAGTTTACTGCACTTAATGCTTGGACATGGTTGAGGCTGTTTGTGCTCTTGATTGTGGCTTTTGCTGGAAAAGTTGCTGGAACTGTTATATCTGGGGCAATGCTGGGATTTCACTGGCCTGAATCTGTTGCAATTGGGATGCTTCTTGTCACTAAGGGTCATTTACAAATCTACTTGGCTATCAAAGTGGTAGGTTGCGGTGCTTCATCTCTTTCCACCGGCATTACGATGATAATTGCAACCTTTTTAACAGCTTTGCCGGTCTCACCAATAGTGGCAAACATCATCAAACGTGCAAGGAAAAGAGCACCAGCTCATCGTTTGGCGCTTCAGTTGCTTGACCCTTCGAGCGAGCTAAGGATCCTCCTGTGTGTGCAAGGACCTCAGAATGTCCCTGCATCCATCAACTTGGTGGAGATCACGAAAGGCGCGGCCAAGACCGCGGGCATTGTGGTGTATGTCACTGACATGATTGAGCTCACTGATGAGATATTAGACCCGTTGGAGAGGGATGAAGCAGTGCACACGGCCACGGTGAAGGACAAGGAAGTGATGGAGAGGAGGGACCAAGTTACCAACTCATTCCAAGCCTATGTGGTGGAGAATGATGATGGCATTACACTCAAAAGAACCATGGCACTCTCAACAATCACTGACATGCCACAGGACATTTGCATTTTAGCAGAGGATTTGATGATTGCACTTATCATATTGCCATTCCACAGGAGTCAGCGCGAGGATGGAAACTTGGACGGTGATCCAACCTCCAAGGTTTTTGGTTTAAATAGATGTTTTGTTGAACAGGTACTAAGAAGTTCCCCTTGTTCCGTTGGGATTCTAGTAGATAGAGGCCTTGGATCAGTTGAACATATATCAAGAAGCCAAGTAACAGTAAATGTGGCAGTCATTTTCATTGGTGGAAAAGATGATAGGGAAGCACTTGCCTACGCGAGCCGTGTGGCGCGGCATCCACAGGTCAAGCTGACAGTAATAAGATTCCTGGAAGACAGCAATGAAGTGTCCTCGGCACTATACAGCATCATTGTTCCGGAGCAGGAGAAGGAGAAGCAGATGGATGATGAATGCTTTACGCAGTTCTACGAAAGCCATGTGATCGGAGGTAGGATTTCCTACATGGAAAAGCATCTTGCAAACGCCGCTGAGACTTTCTCTACTCTAAGATCATTTGAAGGGCTATACTCATTGGTAATTGTTGGAAGAGAAGGAGGGATGAACTCTGTTTTGACAAGGGGGATGAATGATTGGCAACAGTGCCCTGAATTGGGACCAATAGGGGATGTTCTTTCAGGATCAGACTTTTCATTGACTCTTTCTGTTTTGATCATCCAACAACATAGAATTAAAGGAGAAATAGATGGGTTGGATGAAGACTTCTCTATCATATAA 2397 0.4618 MAFGLPMKTMEPSVCGDKLGNLIFEVAKNFVLYMGMVIACNGLHFLLKPYKQPRITSDIIVGLIVGNIGIVRKVFEKFNSTFIYIIDFGMTCYMFALGLEMDPYVLFARPNRYTKVALGGVLCTFIITCISTPAIRFFPGEYRLVELTVALAALVSGTNSPVLTRLITQHKIGKSDIGKIVIAAGMHSDFMCCMIICIGYIIMPLPHFCHHLENRIDIKKSLKMFCAVVVQIGFTAMVSPMVMKWVSSENPEGKPMKGPHLVLSIAFMVLMCASTTMYYYNPILSAFLVGLCVPREGRVSKWVITKINYLMTTIFFPIFFLWMGYEADFRQFTALNAWTWLRLFVLLIVAFAGKVAGTVISGAMLGFHWPESVAIGMLLVTKGHLQIYLAIKVVGCGASSLSTGITMIIATFLTALPVSPIVANIIKRARKRAPAHRLALQLLDPSSELRILLCVQGPQNVPASINLVEITKGAAKTAGIVVYVTDMIELTDEILDPLERDEAVHTATVKDKEVMERRDQVTNSFQAYVVENDDGITLKRTMALSTITDMPQDICILAEDLMIALIILPFHRSQREDGNLDGDPTSKVFGLNRCFVEQVLRSSPCSVGILVDRGLGSVEHISRSQVTVNVAVIFIGGKDDREALAYASRVARHPQVKLTVIRFLEDSNEVSSALYSIIVPEQEKEKQMDDECFTQFYESHVIGGRISYMEKHLANAAETFSTLRSFEGLYSLVIVGREGGMNSVLTRGMNDWQQCPELGPIGDVLSGSDFSLTLSVLIIQQHRIKGEIDGLDEDFSII 798
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g0016 798 Pfam Sodium/hydrogen exchanger family 35 423 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Aed1g0016 798 PANTHER CATION/H+ EXCHANGER 3 14 795 - -
Aed1g0016 798 PANTHER CATION/H + ANTIPORTER 14 795 - -
Aed1g0016 798 Gene3D - 29 435 IPR038770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g0016 Aed-Chr1 502406 507289 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g0016 8 798 Antiporter Super Family AT3G52080 45.241 0.0 707
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g0016 - - gmx:100786469 1288.86