Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed1g0006 ATGATCCTTCCCTATTCCCTTTTGTTCACCCTCACAATCCTCTTGTGCTCTCTCCATTCTTTTGTCTGTGCTAACCGTCTCATCCAACAAACATGCAAGGATTGCTCCAAAAATGACCCCAACATAAGCTACAAATTTTGTGTAGCATCATTCCAATCAGATCATAGGAGCCACTACTACGCCAAAAACCTCCAAGAGCTAGGGCTAATCTCCATCAAGATAACAAGGCACAACGTGACGGATACCAATGCTCACATCAATGAGCTTTTGAAGAAAAACAAGAGCTTAGACCCATTTGTCAAAGAATGCTTAGATGATTGCCTTGAAGTCTATTCTGACACCATTTCCACTTTTAGAGAAGCCATTAGAGACTACAAGGCAAAACGTTATGCTGATTGTAATGTCAAGCTAAGCTCAATCATTGATGCCTCTACCACATGTGAAGATGGATTCAAACAAAAGAATGCGGTAACTTCAAGCAATAGTGATCTCATATTGTCTTTAGCTTAA 510 0.402 MILPYSLLFTLTILLCSLHSFVCANRLIQQTCKDCSKNDPNISYKFCVASFQSDHRSHYYAKNLQELGLISIKITRHNVTDTNAHINELLKKNKSLDPFVKECLDDCLEVYSDTISTFREAIRDYKAKRYADCNVKLSSIIDASTTCEDGFKQKNAVTSSNSDLILSLA 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed1g0006 169 Gene3D Invertase/pectin methylesterase inhibitor family protein 23 169 IPR035513 -
Aed1g0006 169 PANTHER PLANT INVERTASE/PECTIN METHYLESTERASE INHIBITOR 6 157 - -
Aed1g0006 169 CDD PMEI-Pla_a_1_like 32 159 IPR034088 -
Aed1g0006 169 PANTHER PECTINESTERASE 6 157 - -
Aed1g0006 169 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 25 160 IPR035513 -
Aed1g0006 169 TIGRFAM PME_inhib: pectinesterase inhibitor domain 8 160 IPR006501 GO:0004857
Aed1g0006 169 Pfam Plant invertase/pectin methylesterase inhibitor 27 156 IPR006501 GO:0004857
Aed1g0006 169 SMART PMEI_2 23 168 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed1g0006 Aed-Chr1 98503 99432 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed1g0006 71 156 Carbohydrate Esterase AT3G14310 31.915 7.75e-07 46.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed1g0006 - - gmx:100306248 287.345