Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g1950 ATGGGGCACTCCAATGTGTGGAACTCTCATCCCAAGAACTACGGACCTGGTTCCCGAACCTGCCGTGTGTGTGGGAATCCTCATGGATTGATCAGGAAGTATGGGCTTATGTGTTGCAGGCAGTGCTTCCGTAGCAATTCCAAGGAAATTGGCTTCATTAAGTATCGCTGA 171 0.4971 MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNSKEIGFIKYR 56
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g1950 56 Pfam Ribosomal protein S14p/S29e 7 56 IPR001209 GO:0003735|GO:0005840|GO:0006412
Aed11g1950 56 PANTHER 40S RIBOSOMAL PROTEIN S29 1 54 - -
Aed11g1950 56 PANTHER 40S RIBOSOMAL PROTEIN S29 1 54 IPR039744 GO:0003735|GO:0008270
Aed11g1950 56 Gene3D 30s Ribosomal Protein S14; Chain N 1 56 IPR043140 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g1950 Aed-Chr11 22233737 22235414 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed11g1950 1 56 Cytoplasmic Ribosomal Protein Gene Family AT4G33865 91.071 4.31e-34 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g1950 K02980 - gmx:100790389 130.183
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g1950 11 22233737 22235414 Aed1g2004 1 16922672 16927445 PCT