Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g1930 ATGCCACGGCACAATCATGGGCCTTCAATTCCCACCGCATCAGTTCTCAACACAGGGAAAGACGTGGTTAAAGCGTGGAGGTTGTTCATAGATTTTCAACATGATGAGATTCTAATCTCTTGCAGTGGAGGTAATCTAATAGATGGAACTGACTTCCCTGCTTTGGTAGGAAATGGCACTACCTTTGTTGGATCTTCAGTGCCAGATTTGGATAGCTCAATCAACACAGCTCAAGATTTATCCCAAATTTCAGCCATCATCCAGCTTATTGGCACCCAGTTTGGAGTCAAGCCTCCTACTTTTCCTATGCCTAAAACCATCAAGTTGGTCAACGATGGTTACAGCATGGAGAATAATCACCTTTTGGGACGGCTGGATCATTGGAACTTGACTTGGGAGTGGACAAGAGGGGAATTTATATACAGTATGAAAGGTGCTTTCACACGTGAGATAGACTACTCAGGTTGCATCTCTGGTGATTCTGGTAAGTATTACAAGGACATGGATTTCTCTAAAGTAGCTAACTGTCAAAAGAATCCAATAGTCAGTGACTTGCCTCCAGAGAAATATGATGACCCTGAAATTGGAAAGGTACCTTACTGTTGCAAAAACGGAACTCTTTTACCTATCCATGGATCAAGCAAATCCAAGTCTGCTTTCCAAATGCAAGTGTTCAAAGTTCCACCTGATTTAAACAAAACCGCAATTTACCCTCCAGAGAAATGGAAAATTATGGGCATTCTAAACCCGGATTACAAATGTGGGCCACCTATTAGAGTAGAACCTAGACGATCTCCAGACCCTAGGGACTTGAAGCAACGGTTATTGCCATTTCAATTTCTGACTTCAAAGGTGGGTGGAGTGCCAGGATCACTCTCTTCAATTGGAAGCATACCAATTTTGAGAATTGGTTCACTGCACTTCAAGAAGGCTTCTCTTGGTTACGAAAAAGTATATTCTTTTAATGGAACATTCCTTCCAAAGCTCAACCACACTATATTCTTGCAAGGACTACAAGGATCAAACTTCTTGATAGCTTTAGACAATGGAACAAACCCAAAGGTGCCTGGAAAACAACAATCTGTTGTTTCCTTTACTAAGAAGTACACACCAAGCATCAGAATTGCTAAAGGAGATGGCTTCCCTTCCAAGGTCTTTTTTTTTAATGGCGAAGAGTGTTCTATTCCCTACCCGATTCCTGTCGGAAGTGGAAATTACCACATCATGTAG 1230 0.4179 MPRHNHGPSIPTASVLNTGKDVVKAWRLFIDFQHDEILISCSGGNLIDGTDFPALVGNGTTFVGSSVPDLDSSINTAQDLSQISAIIQLIGTQFGVKPPTFPMPKTIKLVNDGYSMENNHLLGRLDHWNLTWEWTRGEFIYSMKGAFTREIDYSGCISGDSGKYYKDMDFSKVANCQKNPIVSDLPPEKYDDPEIGKVPYCCKNGTLLPIHGSSKSKSAFQMQVFKVPPDLNKTAIYPPEKWKIMGILNPDYKCGPPIRVEPRRSPDPRDLKQRLLPFQFLTSKVGGVPGSLSSIGSIPILRIGSLHFKKASLGYEKVYSFNGTFLPKLNHTIFLQGLQGSNFLIALDNGTNPKVPGKQQSVVSFTKKYTPSIRIAKGDGFPSKVFFFNGEECSIPYPIPVGSGNYHIM 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g1930 409 PANTHER COBRA-LIKE PROTEIN 7 305 403 - -
Aed11g1930 409 PANTHER COBRA-LIKE PROTEIN 7 12 115 - -
Aed11g1930 409 PANTHER COBRA-LIKE PROTEIN 7 115 273 - -
Aed11g1930 409 Pfam COBRA-like protein 115 270 IPR006918 GO:0010215|GO:0031225
Aed11g1930 409 PANTHER COBRA-LIKE PROTEIN 7 115 273 - -
Aed11g1930 409 PANTHER COBRA-LIKE PROTEIN 7 305 403 - -
Aed11g1930 409 PANTHER COBRA-LIKE PROTEIN 7 12 115 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g1930 Aed-Chr11 22100636 22102477 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed11g1930 305 407 COBRA Gene Family AT4G16120 51.376 1.92e-25 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g1930 - - gmx:100799716 424.861