Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g1923 ATGAATCATTCTCTAATGGTTTCAAAACCCATTGAATTGCTCTTTCTTTGCACTCTTGCTTTATTATTTTCAGACGTTGTATTTGCCGATCCTCCATATTATATTTGTTCCACAAGCAGCAGTTATGCAAACGGCAGTTCCTTTGAGAACAATCTAATGAACCTCCTTTCCTCTTTTTCCTCTAATACTTCAATCTCCAAATTCAATAATACTTCTTCTTCTTCTAATGGGATTGCCCCGGATAGAGTTTATGGCCTCTACATGTGCCTCCACTATATTACAAATGAATCTTGCAACAAATGCATCACCACAGCAACAGAGGACATTCTCAAACTCTGTCCTCAAGCTACAGAAGCAGTGTTATGGGAGGAGTTGTGTCAATTACGTTATTCCAATATCAATTTCATTGGTAGGTTGAATGTCACTGGGAACATTGGCTTAGATAACAAACAGAATATTTCAGAGCCAGAGAAATTCGAGTCTGCTGTGAATCAGACATTAAGTAATCTTACTCAGGTAGCAGCATTTTTTGGTGTTTCGGCAAACATGTATGCTACTGAACAAGTCCCCTTTGAAGATGAAACAATATATGCCTTAGTACAGTGCACCAGTGATTTAACTACCAGTGACTGTAGTAGGTGCCTTCAAAGTGCCATTGGAGATATACCAGGTTGCTGCTATGCCTCCATTGGGGGTAGAGTTCTGAGCCGTAGCTGTTACTTAAGGTATGAATTTTATGCCTTTTATCATGGTTCAAAAGGACCCACGGATACTTCAATTGGACAGAAACAAGGCAAAAATAATTCAAGCAAAATATGGATGATTACAGGAATTATAGTTGTGGTAGGCTTGGTGATAGTATTTTTCATTTTCGGACTGTACCTTGTCAGGAATAAAAGAAAACGGCAGAGTAATGGATATATGGCTCCAGAGTATGCAATGGAGGGATTATACTCTATAAAATCTGATGTATTTGGGTTTGGTGTACTATTGCTTGAGATCATTACAGGGAAACGTAACGCGGGTTACAAAAATAAAAATTGGTTGAGTTGTTCTGATTCTAAACTTCAACTCTAG 1077 0.3825 MNHSLMVSKPIELLFLCTLALLFSDVVFADPPYYICSTSSSYANGSSFENNLMNLLSSFSSNTSISKFNNTSSSSNGIAPDRVYGLYMCLHYITNESCNKCITTATEDILKLCPQATEAVLWEELCQLRYSNINFIGRLNVTGNIGLDNKQNISEPEKFESAVNQTLSNLTQVAAFFGVSANMYATEQVPFEDETIYALVQCTSDLTTSDCSRCLQSAIGDIPGCCYASIGGRVLSRSCYLRYEFYAFYHGSKGPTDTSIGQKQGKNNSSKIWMITGIIVVVGLVIVFFIFGLYLVRNKRKRQSNGYMAPEYAMEGLYSIKSDVFGFGVLLLEIITGKRNAGYKNKNWLSCSDSKLQL 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g1923 358 Gene3D Transferase(Phosphotransferase) domain 1 288 357 - -
Aed11g1923 358 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 25 27 328 - -
Aed11g1923 358 ProSiteProfiles Gnk2-homologous domain profile. 141 248 IPR002902 -
Aed11g1923 358 PANTHER CYSTEINE-RICH REPEAT SECRETORY PROTEIN 27 328 - -
Aed11g1923 358 Pfam Salt stress response/antifungal 151 245 IPR002902 -
Aed11g1923 358 Pfam Salt stress response/antifungal 36 132 IPR002902 -
Aed11g1923 358 Gene3D - 144 248 IPR038408 -
Aed11g1923 358 Gene3D - 31 135 IPR038408 -
Aed11g1923 358 SUPERFAMILY Protein kinase-like (PK-like) 296 340 IPR011009 -
Aed11g1923 358 Pfam Protein tyrosine and serine/threonine kinase 297 339 IPR001245 GO:0004672|GO:0006468
Aed11g1923 358 ProSiteProfiles Gnk2-homologous domain profile. 30 135 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g1923 Aed-Chr11 22045203 22048038 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed11g1923 290 349 Receptor kinase-like Gene Family AT4G05200 50.000 6.43e-12 65.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Aed11g1923 Stress-antifung 5e-16 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g1923 - - gmx:100798666 473.396