Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g1918 ATGAAAACGGCCACTTCTATCAAACTTAGGATCAACAGTCCCAAAGAGGAAGCAGCTTTGCAGGATTGTGTGGAGCTGATGGACTTATCCATGAGCAGAGTTTGGGACTCAATGGTGACTCTAACAAAAGAAACCATTGAGTCTGAACAAGATGCACACACGTGGCTAAGTAGCGTGCTCACTAACCATGCAACTTGCTTGGATGGGTTAGAGTTAGAGGGGACAGGTCGTGCCCTGATGAAGGCTGAAGTGGAGGACTTGATGTCAAGAGCAAGAACATCTCTAGCCATGTTTGTTGCTGTTGCTGTCTTGCCTGATCCAAAGGTTGATGGAGGGAAGTTTCCCTCTTGGGTCAACAGCAGGGACCGGAGGCTCTTGGAGTCTACAGTTAGGGACATCAAGGCTAATGTTGTGGTAGCTAAAGATGGAAGTGGTAAGTTTAAGACTGTGGCTGAGGCTGTGGCATCTGCACCTGACAACGGTAAGACAAGGTACGTTATTTATGTTAAAAAAGGAACATATAAAGAGAATGTTGAAATTGGTAAGAAGAAGGCCAACGTCATGCTCCTCGGGGATGGTATGGATGCAACTGTAATCACTGGCAACTTGAATTTCGTCGACGGAACTACAACATTTAAGACAGCCACTGTTGCGGCTGTGGGAGATGGATTTATAGGTCAAGACATATGGTTCCAAAACACAGCGGGCCCAGAGAAGCACCAAGCAGTGGCTCTTCGCGTAGGCGCCGACCAATCCGTCATAAACCGCTGCCGCATTGATGCCTTCCAAGACACTCTCTATGCCCACTCCAACAGGCAGTTCTACCGAGACTCCTTTATAACTGGCACCGTTGACTTCATATTTGGAAATGCAGCTGTTGTGTTCCAAAAGTGCAACCTGGTGGCACGAAAGCCCATGAGTAAACAGAACAACATGGTGACGGCCCAAGGACGAGAAGATCCAAACCAGAACACAGGAACTTCAATTCAACAATGTAACCTAACTCCGAGTTCGGATCTAAAGCCTGTGGTGGGTTCTTTCAAAACATATCTGGGCCGCCCATGGAAGAAGTACTCAAGAACGGTTGTGATGCAGTCAACATTGGAGAGTCACATTGACCCAACAGGATGGGCAGAGTGGGATGCACAGAGTAAAGATTTTTTGCAAACGCTGTATTATGGTGAGTACATGAATAGCGGGCCAGGCGCTGGTACCAGCAAGAGAGTCAATTGGCCTGGTTACCATATCATCAAAACTGCCGCAGAGGCCACCAAGTTCACAGTAACAGAGCTCATCCAAGGCAATGTTTGGTTGAAGAACACCGGTGTCAACTTCATTGAAGGCCTCTAA 1350 0.4748 MKTATSIKLRINSPKEEAALQDCVELMDLSMSRVWDSMVTLTKETIESEQDAHTWLSSVLTNHATCLDGLELEGTGRALMKAEVEDLMSRARTSLAMFVAVAVLPDPKVDGGKFPSWVNSRDRRLLESTVRDIKANVVVAKDGSGKFKTVAEAVASAPDNGKTRYVIYVKKGTYKENVEIGKKKANVMLLGDGMDATVITGNLNFVDGTTTFKTATVAAVGDGFIGQDIWFQNTAGPEKHQAVALRVGADQSVINRCRIDAFQDTLYAHSNRQFYRDSFITGTVDFIFGNAAVVFQKCNLVARKPMSKQNNMVTAQGREDPNQNTGTSIQQCNLTPSSDLKPVVGSFKTYLGRPWKKYSRTVVMQSTLESHIDPTGWAEWDAQSKDFLQTLYYGEYMNSGPGAGTSKRVNWPGYHIIKTAAEATKFTVTELIQGNVWLKNTGVNFIEGL 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g1918 449 Pfam Pectinesterase 136 435 IPR000070 GO:0030599|GO:0042545
Aed11g1918 449 Pfam Plant invertase/pectin methylesterase inhibitor 11 97 IPR006501 GO:0004857
Aed11g1918 449 TIGRFAM PME_inhib: pectinesterase inhibitor domain 5 86 IPR006501 GO:0004857
Aed11g1918 449 ProSitePatterns Pectinesterase signature 2. 280 289 IPR033131 -
Aed11g1918 449 Gene3D - 130 449 IPR012334 -
Aed11g1918 449 PANTHER PECTINESTERASE 7 447 - -
Aed11g1918 449 CDD PMEI-like_4 1 101 - -
Aed11g1918 449 ProSitePatterns Pectinesterase signature 1. 161 180 IPR018040 -
Aed11g1918 449 Gene3D Invertase/pectin methylesterase inhibitor family protein 1 101 IPR035513 -
Aed11g1918 449 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 10 98 IPR035513 -
Aed11g1918 449 PANTHER PECTINESTERASE 7 447 - -
Aed11g1918 449 SUPERFAMILY Pectin lyase-like 134 448 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g1918 Aed-Chr11 22022603 22024031 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed11g1918 1 449 Carbohydrate Esterase AT1G11580 61.404 0.0 580
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g1918 K01051 - gmx:100815836 806.594