LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Aed11g1917	ATGTCGTATCTATCAATATCATTAGTGTTACTATTTTTGATTTCATGTGGAATTCATGAAAATGAAGGTCAAGGTCCTGAGGCATTGCCACCAGCAGCAGAAACTTGTAACGGGGTTTTCATTTCCTATGACTTTCTGAGTCGAAGGAAAGAGTTCCCTCACGTGAAGAATGCCACGGCACAATCATGGGCCTTCAATTCCACCGCATCAGTTCTCAACACAGGGAAAGACGTGGTTAAAGCGTGGAGGTTGTTCATAGATTTTCAACATGATGAGATTCTAATCTCTTGCAGTGGAGGTAATCTAATAGATGGAACTGACTTCCCTGCTTTGGTAGGAAATGGCACTACCTTTGTTGGATCTTCAGTGCCAGATTTGGATAGCTCAATCAACACAGCTCAAGATTTATCCCAAATTTCAGCCATCATCCAGCTTATTGGCACCCAGTTTGGAGTCAAGCCTCCTACTTTTCCTATGCCTAAAACCATCAAGTTGGTCAATGATGGTTACAGGTGCCCCCCACCAACTATCCGTAAGAGTTCCATGTATGCGTGTTGTGAAAAAGACCCAAAATTCAAGGCTATACTACGGAAGACAAAATTCTTTACACGCCAAAAAGGGGATCTTACCATATCCTATGACGTGAATCAAGTGTTTGAGAACAATTATATGGTTGAGGTGAGCATGGAGAATAATCACCTTTTGGGACGGCTGGATCATTGGAACTTGACTTGGGAGTGGACAAGAGGGGAATTTATATACAGTATGAAAGGTGCTTTCACACGTGAGATAGACTACTCAGGTTGCATCTCTGGTGATTCTGGTAAGTATTACAAGGACATGGATTTCTCTAAAGTAGCTAACTGTCAAAAGAATCCAATAGTCAGTGACTTGCCTCCAGAGAAATATGATGACCCTGAAATTGGAAAGGTACCTTACTGTTGCAAAAACGGAACTCTTTTACCTATCCATATGGATCCAAGCAAATCCAAGTCTGTTTTCCAAATGCAAGTGTTCAAAGTTCCACCTGATTTAAACAAAACCGCAATTTACCCTCCAGAGAAATGGAAAATTATGGGCATTCTAAACCCGGATTACAAATGTGGGCCACCTATTAGAGTAGAACCTAGACGATCTCCAGACCCTAGGGGACTTGAAGCAACGGTTATTGCCATTTCAAGTTGGCAAATTGTGTGCAATATTAGTAAGCCAGCCAAGAGGAGCACTCGCTGTTGTGTTTCTTTCTCTGCTTATTACAATGAGTCCGTAGTACCTTGCAACACATGTGCCTGTGGTTGTGACGACAATACAAATACAAGAAAATGTAATCCCAATTCACCAGCAATGCTTCTCCCTCCAGAAGCTCTTCTTGTACCCTTTGATAATAGGACAAAAAAGACTATTGCTTGGGCCAAACTAAAGCATTTTAAGGTCCCAACAAGATTACCATGTGCTGACAACTGTGGAGTTAGCATCAACTGGCATGTAGTTTCTGACTTCAAAGGTGGGTGGAGTGCCAGGATCACTCTCTTCAATTGGAAGCATACCAATTTTGAGAATTGGTTCACTGCACTTCAATTCAAGAAGGCTTCTCTTGGTTACGAAAAAGTATATTCTTTTAATGGAACATTCCTTCCAAAGCTCAACCACACTATATTCTTGCAAGGACTACAAGGATCAAACTTCTTGATAGCTTTAGACAATGGAACAAACCCAAAGGTGCCTGGAAAACAACAATCTGTTGTTTCCTTTACTAAGAAGTACACACCAAGCATCAGAATTGCTAAAGGAGATGGCTTCCCTTCCAAGGTCTTTTTTAATGGCGAAGAGTGTTCTATTCCTACCCGATTCCCTGTCGGAAGTGGAAATTACCCACATCATGTAGATTTAGTTAACCAACTATTAGCTTTAGTGTTAGCTGTTACAATCACTCAAATATTGTTTTAA	1947	0.4104	MSYLSISLVLLFLISCGIHENEGQGPEALPPAAETCNGVFISYDFLSRRKEFPHVKNATAQSWAFNSTASVLNTGKDVVKAWRLFIDFQHDEILISCSGGNLIDGTDFPALVGNGTTFVGSSVPDLDSSINTAQDLSQISAIIQLIGTQFGVKPPTFPMPKTIKLVNDGYRCPPPTIRKSSMYACCEKDPKFKAILRKTKFFTRQKGDLTISYDVNQVFENNYMVEVSMENNHLLGRLDHWNLTWEWTRGEFIYSMKGAFTREIDYSGCISGDSGKYYKDMDFSKVANCQKNPIVSDLPPEKYDDPEIGKVPYCCKNGTLLPIHMDPSKSKSVFQMQVFKVPPDLNKTAIYPPEKWKIMGILNPDYKCGPPIRVEPRRSPDPRGLEATVIAISSWQIVCNISKPAKRSTRCCVSFSAYYNESVVPCNTCACGCDDNTNTRKCNPNSPAMLLPPEALLVPFDNRTKKTIAWAKLKHFKVPTRLPCADNCGVSINWHVVSDFKGGWSARITLFNWKHTNFENWFTALQFKKASLGYEKVYSFNGTFLPKLNHTIFLQGLQGSNFLIALDNGTNPKVPGKQQSVVSFTKKYTPSIRIAKGDGFPSKVFFNGEECSIPTRFPVGSGNYPHHVDLVNQLLALVLAVTITQILF	648

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Aed11g1917	648	PANTHER	COBRA-LIKE PROTEIN 7	5	645	-	-
	Aed11g1917	648	Pfam	COBRA-like protein	223	402	IPR006918	GO:0010215\|GO:0031225
	Aed11g1917	648	PANTHER	COBRA-LIKE PROTEIN 7	5	645	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Aed11g1917	Aed-Chr11	22013494	22021043	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Aed11g1917	14	642	COBRA Gene Family	AT4G27110	54.890	0.0	737

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Aed11g1917	-		-	gmx:100799716	1164.06