Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g1911 ATGGGTACGATGCTACAAACCATTCTGACTGTGCTTCTTCTCCTTATGCTTCTTCTCATCATCATCTTCCTCTTTTTTCTCTTCAAACCATGGCGCTTCTTCTTCTCTTCTCGTTTCCGCTCCTCCATCAAGGGCGAGCTAGAGCGGCCCCTTGTTGCGGACGAAGGTGATGCGTCGTCGTTTAATCAGAGGAATGAATTGCCTCGAGATTATGATCTCGAGGGTGCGTGTTATCCCAATGAAGCTCATTTTCGGTCTCCTCGAACCCATGGCCAAGGCCTTGTTCATAAGCCAAGGCTTCAAGCCCTTAACTTGCCCCAGGCTTGTGATACTTTGGTTGTCGATGTGATCTCTGATCATTCCTCTGAGGATCTCGATGTTGGCCAAACGCTTAAGCTTCCCTCAGCTCAAATTCAAAACCATTCCCCGCCCATTTTTCTAAATGATAGACTTCACGACTTCGTGCGAAGGGATATCTCTGATCAAAGAAGTTGCCTCACTCTGGAGATCATCAGTGGCCCTTCTCGTGGACTTCGTTATTCAGTACTGTCCACAGATCCCTCTCGTCTTCCACTCACATTGGGAAGAGTTTCTCCAAGTGATTTGTTGTTAAAGGATTCCGAAGTCTCAGGAAAGCATGCCATGATAAAGTGGAATTTGGATATAATGAAATGGGAGTTGGTGGATATGGGCAGCCTCAATGGAACACTGTTGAATTCTAAGACAATCAACCATCCAGACACTGGAAGTAGGAATTGGGGGGATCCTATGAATCTTACTAATGGAGATATCATAACACTTGGAACAACATCAAAAGTAATGGTTCATATTACATCACAAACTCAGCATCACATTCCCTTTGGAGTTGGTATGGCATCAGATCCAATGGCTTTGCGTCGAGGTGGAAAAATTTTTCCTATGGAAGACGTTTGCTATTATCAATGGCCTCTACCTGGGCTGGATCAGTTTGGAATTTTTGGCATTTGTGATGGACATGGTGGAGATGGGGCTGCCAAATCTGTTAGCAAACTCTTTCCTGAGATAATTGCTAGTATATTATCGGATTCATTAAAAAGGGAGAGGGTTTTATCACTCTGTGATGCTTCGGATATTCTTCGAGATGCATTTTCTCAAACAGAAGCACACACGAATCACTATTATGAGTTTGTTTGTATAACCAACTGGAATGCTTCAGATATAACTTGTTTGAATGGGTCAAGGGTATTTAGGGTAGGAAACATGACAACTGGGCTATCAGAAACAAATAATGGTTTATGCTATGTGAATGGGAAACAAATCAAGATGACAGAAGATCACAAGATAACAAATTATTCTGAAAGACTCAGAATCGAAGAGACAGGTGAACCATTAAAAGATGGGGAAACACGTCTATATGGTATAAATCTGGCAAGAATGCTTGGAGACAAATTCCTGAAACAGCAGGATTCCCGGTTCAGTTCAGAACCTTACATTAGTCAAGTTGTGCATGTTGATCAAGCAAGCAAGGGTTTTGCTATTTTAGCTAGTGATGGGTTATGGGATGTCATCAGCGTGAAGAAGGCAATTCAGCTTGTGTTGCAGATGAAGGAGAGATGCTATTCAGAGAGAGAAAATACAGCAGAAAAGACTGCTAGTTTGTTGTTGAATGAGGCTAAAACACTCAGAACAAAGGATAATACCTCTGTAATTTTCTTAGATTTTGATACCTTCAACAGATTCTCTTGTAAAGTTGAATCCTAG 1740 0.4201 MGTMLQTILTVLLLLMLLLIIIFLFFLFKPWRFFFSSRFRSSIKGELERPLVADEGDASSFNQRNELPRDYDLEGACYPNEAHFRSPRTHGQGLVHKPRLQALNLPQACDTLVVDVISDHSSEDLDVGQTLKLPSAQIQNHSPPIFLNDRLHDFVRRDISDQRSCLTLEIISGPSRGLRYSVLSTDPSRLPLTLGRVSPSDLLLKDSEVSGKHAMIKWNLDIMKWELVDMGSLNGTLLNSKTINHPDTGSRNWGDPMNLTNGDIITLGTTSKVMVHITSQTQHHIPFGVGMASDPMALRRGGKIFPMEDVCYYQWPLPGLDQFGIFGICDGHGGDGAAKSVSKLFPEIIASILSDSLKRERVLSLCDASDILRDAFSQTEAHTNHYYEFVCITNWNASDITCLNGSRVFRVGNMTTGLSETNNGLCYVNGKQIKMTEDHKITNYSERLRIEETGEPLKDGETRLYGINLARMLGDKFLKQQDSRFSSEPYISQVVHVDQASKGFAILASDGLWDVISVKKAIQLVLQMKERCYSERENTAEKTASLLLNEAKTLRTKDNTSVIFLDFDTFNRFSCKVES 579
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g1911 579 Coils Coil 570 579 - -
Aed11g1911 579 SUPERFAMILY PP2C-like 304 568 IPR036457 -
Aed11g1911 579 Gene3D - 298 574 IPR036457 -
Aed11g1911 579 Gene3D - 160 297 - -
Aed11g1911 579 Pfam FHA domain 193 268 IPR000253 GO:0005515
Aed11g1911 579 ProSiteProfiles PPM-type phosphatase domain profile. 288 567 IPR001932 -
Aed11g1911 579 CDD PP2Cc 306 567 IPR001932 -
Aed11g1911 579 Pfam Protein phosphatase 2C 305 560 IPR001932 -
Aed11g1911 579 SUPERFAMILY SMAD/FHA domain 164 275 IPR008984 GO:0005515
Aed11g1911 579 PANTHER PROTEIN PHOSPHATASE 2C 70 34 578 - -
Aed11g1911 579 CDD FHA 166 274 IPR000253 GO:0005515
Aed11g1911 579 ProSiteProfiles Forkhead-associated (FHA) domain profile. 192 243 IPR000253 GO:0005515
Aed11g1911 579 SMART FHA_2 191 243 IPR000253 GO:0005515
Aed11g1911 579 ProSitePatterns PPM-type phosphatase domain signature. 325 333 IPR000222 GO:0043169
Aed11g1911 579 PANTHER PROTEIN PHOSPHATASE 2C 34 578 IPR015655 GO:0004722|GO:0006470
Aed11g1911 579 SMART PP2C_4 282 565 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g1911 Aed-Chr11 21968690 21981129 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed11g1911 1 569 PP2C-type Phosphatase Gene Family AT5G19280 52.333 0.0 555
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g1911 K01090 - gmx:100170642 919.457