Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g1899 ATGTTATTTATGTCTCTGGCATTGGATTTGGATAATAACTATTTTAGTCGTTTCTGGGAGGCTCTAGAACATGATCACCTCTTTGTTATAAGAAGCTGTCGGTTTTGCGTCTCATTCTGCACTCGCTACTCAGCTCAGGACTCAGGACGTTCGCTCTATTATTGTTCTTGTTCTCAAATACGGATGGTGGAACATGCATATACCGTGACATCTGACAGTGAAACCACTGGAGAAGAAAAATCATCTACTTTTCCTGAAATAGCAATTGGCATTGATATTGGCACATCACAATGTAGTGTTGCTGTGTGGAATGGTTCCCAAGTGGAGCTTTTGAAGAACACAAGGAATCAGAAGATTATGAAATCATATGTAACCTTCAAAGATAACATCCCTTCCGGTGGAGTTAGCAGTCAACTCTCCCATGAGGACGAGATGTTGTCTGGAGCTACGATTTTCAACATGAAACGCTTGATTGGCAGAGTTGATACTGACCCAATTGTCCATTCATGTAAGAATCTCCCATTTCTAGTGCAGACTTTGGACATTGGTGTTCGGCCATTTATTGCTGCATTAGTGAACAATATGTGGAGATCCACGACTCCAGAAGAAGTCCTGGCAATATTTCTGGTGGAATTAAGAGCAATGTCTGAAGCTCAGCTAAAACGAAGAATAAGGAATGTGGTTCTTACAGTTCCAGTTTCATTCAGTCGATTTCAGCTAACCCGGATAGAGCGTGCTTGTGCCATGGCTGGCCTTCATATTCTCAGGTTGATGCCTGAACCAACAGCTGTGGCTTTGTTATATGGACAGCAACAACAGCAGACTTCTCATGAGAATATGGGCAGTGGAACTGAGAAAATTGCTCTCATTTTCAATATGGGTGCTGGTTATTGTGATGTTGCTGTTACTGCTACAGCAGGAGGAGTATCACAGATTAAAGCCTTGGCAGGAAGTACCATTGGTGGTGAAGACTTGCTTCAGAATATGATGCGTCACCTGTTGCCAGATTTTGAAAATCTATTTAAGAACCATGGGGTCAAAGAAATTAAACGGATGGGCCTGCTCCGAGCTGCAACCCAGGATGCAATTCAGCAGCTTTCCTCTCAGACCAGCGTTCAGATACTTTTTGGTGGGGTGCATGGCTTTTGTAATACATCATCTTATTCTTCTGACAACCAAACATACAGTTGTGAATGCTTCCCTGGCTATACACCTTTGGATCCAAGTGCTCCCTCCAAAGGGTGCTATCTCAGTGAGGTCAAGGGCCTGTGTGCTGCAAATTCCTCTGCCCCAGATTTCAAGGTGAAAGTGAAAGAAATTCAGGATGCTGATATACCAAACGATGGTTACTTATCTCTAGATCTACTAGTCTTGGATAACATGACATTGGAAAGCTGCAAGAGGGAACTCATGAATGCCATAAGAAAAAGTGGCCAGTTGTTGCTGTCAAACAACTGGAACACCGAACATGTAGAAGAACAAGGTGAGAAAGAATTGGTTACAGAAGTTCAAGTTATTACTCTAACTCATCATAAAAATCTTGTTGGGCTATTGGGCTTTTGCAATGAGCAGAATCACAGGCTCTTGGTTTATGAGAAAGTGGAAAATGCCTTTTTGGAGAAGGGGGTAAACCCAGCTGGGAGAGTAGATTGCAAGAGGCTGCCATCAATTACTGTGCAGAGTTCAACTTCAAACTGTGTGGTGTCTAGGAAGCTAGAGCTAGTGGTGAGACATAAAGAGTTAGAATATCCAAGTGACAAGAATTTTGGTTCTCTTAATGCGTATGTGCCATGCTCTTGGCAGTGCCGCTGTCGCTGGTGA 1821 0.4294 MLFMSLALDLDNNYFSRFWEALEHDHLFVIRSCRFCVSFCTRYSAQDSGRSLYYCSCSQIRMVEHAYTVTSDSETTGEEKSSTFPEIAIGIDIGTSQCSVAVWNGSQVELLKNTRNQKIMKSYVTFKDNIPSGGVSSQLSHEDEMLSGATIFNMKRLIGRVDTDPIVHSCKNLPFLVQTLDIGVRPFIAALVNNMWRSTTPEEVLAIFLVELRAMSEAQLKRRIRNVVLTVPVSFSRFQLTRIERACAMAGLHILRLMPEPTAVALLYGQQQQQTSHENMGSGTEKIALIFNMGAGYCDVAVTATAGGVSQIKALAGSTIGGEDLLQNMMRHLLPDFENLFKNHGVKEIKRMGLLRAATQDAIQQLSSQTSVQILFGGVHGFCNTSSYSSDNQTYSCECFPGYTPLDPSAPSKGCYLSEVKGLCAANSSAPDFKVKVKEIQDADIPNDGYLSLDLLVLDNMTLESCKRELMNAIRKSGQLLLSNNWNTEHVEEQGEKELVTEVQVITLTHHKNLVGLLGFCNEQNHRLLVYEKVENAFLEKGVNPAGRVDCKRLPSITVQSSTSNCVVSRKLELVVRHKELEYPSDKNFGSLNAYVPCSWQCRCRW 606
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g1899 606 CDD HSP70_NBD 89 374 - -
Aed11g1899 606 Gene3D Actin; Chain A, domain 4 322 376 - -
Aed11g1899 606 Gene3D Phosphorylase Kinase; domain 1 474 535 - -
Aed11g1899 606 Gene3D - 89 272 - -
Aed11g1899 606 PANTHER HEAT SHOCK PROTEIN 70KDA 65 374 IPR013126 GO:0005524|GO:0140662
Aed11g1899 606 Gene3D - 152 207 - -
Aed11g1899 606 Gene3D - 273 321 - -
Aed11g1899 606 SUPERFAMILY Actin-like ATPase domain 285 379 IPR043129 -
Aed11g1899 606 SUPERFAMILY Actin-like ATPase domain 87 271 IPR043129 -
Aed11g1899 606 Pfam Hsp70 protein 88 376 IPR013126 GO:0005524|GO:0140662
Aed11g1899 606 SUPERFAMILY Protein kinase-like (PK-like) 492 546 IPR011009 -
Aed11g1899 606 PANTHER HEAT SHOCK 70 KDA PROTEIN 8 65 374 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g1899 Aed-Chr11 21882778 21887478 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed11g1899 82 374 Calmodulin-binding Proteins AT1G16030 34.680 3.06e-42 159
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Aed11g1899 HSP70 3e-46 CL0108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g1899 K09489 - gmx:100809773 588.186