Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g1863 ATGAGGGGTGGAGGAGGTGCAATTATTGGAGTGCGAGGTCTGAATGAAGATGATGATGAAGAAGAAGAAGAAGAAAACAAGTGGCCACCATGGCTTAGGCCACTTCTCCAAACAAACTTCTTTGCTCAATGCAAAGTCCACGCAGATTCCCACAAAAGTGAATGCAATATGTATTGCTTGGACTGTATCAATGGAGCCCTTTGCTCTGCCTGTCTTGCTTCTCACAGAGAACACACAGCTATTCAGATAAGGAGATCTTCGTACCATGATGTGATAAGGGTGTCGGAGATACAGAAATTTGTGGACATAACAGGGGTCCAAACATACATTATTAACAGTGCCAAGATTGTGTTCTTGAATGAGAGGCCTCAACCTAGGCCTGGCAAAGGAGTCACCAACACCTGCCAAGTCTGTGACCGCAGCCTTCTTGATTCATTCACCTTCTGTTCCCTTGGTTGTAAGATAGTTGGAACCTCCAACAAGTTCCGGAAGAAGAAAATGTTAGCTGAGACAGATGTTGAAGAATCAATAAATGGCATTAACAATGAAAGTGGAAGAAACAAAATCCAGAGCTTCACACCGTCAACACCACCACCAACAGTGGTAAATTACAGGACTGCTAAGAGGAGAAAGGGAGTCCCACATAGAGCTCCAATGGGGGGTGCCCTTATTATAGAATACTACTAA 687 0.441 MRGGGGAIIGVRGLNEDDDEEEEEENKWPPWLRPLLQTNFFAQCKVHADSHKSECNMYCLDCINGALCSACLASHREHTAIQIRRSSYHDVIRVSEIQKFVDITGVQTYIINSAKIVFLNERPQPRPGKGVTNTCQVCDRSLLDSFTFCSLGCKIVGTSNKFRKKKMLAETDVEESINGINNESGRNKIQSFTPSTPPPTVVNYRTAKRRKGVPHRAPMGGALIIEYY 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g1863 228 Pfam PLATZ transcription factor 84 155 IPR006734 -
Aed11g1863 228 MobiDBLite consensus disorder prediction 1 28 - -
Aed11g1863 228 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 15 222 - -
Aed11g1863 228 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 15 222 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g1863 Aed-Chr11 21702973 21704503 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Aed11g1863 PLATZ 4.2e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g1863 - - gmx:100792668 399.823
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed5g0157 5 1148446 1150917 Aed11g1863 11 21702973 21704503 ECH
Aed11g1863 11 21702973 21704503 Aed11g1863 11 21702973 21704503 ECH