Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g1816 ATGGATCAAGATACAATAACAACATCATCGTACCGTGGGGTTCGGCAGCGGAAATGGGGCAAATGGGTGTCCGAAATTCGGGAGCCAGGGAAGAAGAGCAGAATATGGTTAGGGAGCTACGAGTCGGCGGAGATGGCGGCGGCAGCATATGACGTGGCAGCGTTACACCTTCGGGGACGAGCCGCCAAACTCAATTTCCCCGAATTGGTGGAGACGCTGCCACGTCCGGTGAGTTCGAAACCCGAGGATGTCCAAGTGGCAGCACAACAAGCGGCATTGATGTTGAGGAATAACGGCACTGATAATAATGTGGTTCCTCATGTGAGGGTTGGACTCTCTCCCACACAAATTCAGGCCATCAATGAGTCTCCATTGGACTCACCCAAGACTTGGATGATGCAAATGGCAGAGGCACTCAGGTTTGGGTTTCATGATGATCATCATATCGATCATGATTATGCCTTAAGCTTCGATGACTTTAGTGGATGGGAAGAAATACAGTATGAATCTTTATGGGACTCTTGA 525 0.4971 MDQDTITTSSYRGVRQRKWGKWVSEIREPGKKSRIWLGSYESAEMAAAAYDVAALHLRGRAAKLNFPELVETLPRPVSSKPEDVQVAAQQAALMLRNNGTDNNVVPHVRVGLSPTQIQAINESPLDSPKTWMMQMAEALRFGFHDDHHIDHDYALSFDDFSGWEEIQYESLWDS 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g1816 174 Pfam AP2 domain 10 59 IPR001471 GO:0003700|GO:0006355
Aed11g1816 174 PRINTS Ethylene responsive element binding protein signature 11 22 IPR001471 GO:0003700|GO:0006355
Aed11g1816 174 PRINTS Ethylene responsive element binding protein signature 49 69 IPR001471 GO:0003700|GO:0006355
Aed11g1816 174 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF022 8 137 - -
Aed11g1816 174 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 8 137 - -
Aed11g1816 174 ProSiteProfiles AP2/ERF domain profile. 10 67 IPR001471 GO:0003700|GO:0006355
Aed11g1816 174 SUPERFAMILY DNA-binding domain 9 68 IPR016177 GO:0003677
Aed11g1816 174 CDD AP2 9 69 IPR001471 GO:0003700|GO:0006355
Aed11g1816 174 Gene3D AP2/ERF domain 10 69 IPR036955 GO:0003700|GO:0006355
Aed11g1816 174 SMART rav1_2 10 73 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g1816 Aed-Chr11 21412963 21413487 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed11g1816 9 173 AP2-EREBP Transcription Factor Family AT1G71450 49.143 5.68e-51 160
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Aed11g1816 AP2 5.8e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g1816 - - gmx:100788567 228.409