Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g1794 ATGGAATCTACTATGTTTCAAGAAGAAGGGTCATCTTCTGTAACTTCTTCACCTCTTCAGTTCTTTTCCATGATGTCTCTTTCACCTAGCTTAGGATCTCCCAGTCCCATTCCTTGTTCTAAAGAAATGAAATATGAGGAAAGGGGTTTGTTATTGATCCATTTGTTGCTCGCTGGAGCAAATTTCGTAGCTACCGGTGATTTACATAATGCAAACCTCGCACTTGAGCAGATTTCCCAGCATGCCTCTCCTGATGGGGATTCTATTCAGCGAATTGCTTCGTATTTCACGGAAGCACTCGCTGATCGGATACTCAAAATATGGCCTGGCATCCATAGGGCCCTCAATTTCACCAGAATACCTATGGTTTCTGATGAAATTCTTGTTCAAAGGCTCTTCTTTGACCTTTTGCCGTTCTTGAAGCTTTCATATATTATGACGAATCAGGCTATTTTTGAAGCCATGGGAGCGGAGAAAATGGTCCATATAATCGATCTCAATGCGACCGGACCGACACAGTGGGTTGCTCTCCTCCAAGTTCTGAGTGCACGTCCTGAAGGCCCTCCCCATTTGAGAATTACCGGGGTTCATCACCAGAAAGAGGTTTTGGATCAGATGGCTCATAAACTCACTGAAGAGGCTGAAAAGTTGGATATCCCATTCCAATTCAACCCTGTGGTCAGCAAGTTGGAAAATCTTGACTTTGACAAACTTCGTGTTAAAACTGGGGAGGCACTAGCAATAAGTTCTATTCTGCAATTGCACACCCTTCTGGCCTTGGATGATGATGCTTTGCAGGGAAGATCACCTCCTTTATCAAAAAACTCAAATGCAATTAACCTGCAGAAAGGCCTGTTGAACCAAAACACATTAATTGATTTGCTTGAAAATAGTCCCAGTCCTGATTCAGCTTCAGCCTCAGCCTCAGGCTCGGCCTCATCCTCGCCAGCATCTTCACCTGCTTTGATGAATTCAGAGAGCTTTCTGAATGCCTTGTGGGGGTTATTCCCAAAGATCATGGTTGTAACTGAACAAGACTCAAATCACAACAGTTTGTCCATGATGGAGAGGCTGCCAGAAGCTCTATATTCTTATTCTGCATTTTTTGATTGTCTGGAATCCACTGTCACAAGGGCATCCTTGGACAGAATAAAACTTGAGAAAATGCTTTTTGGTGAGGAGATAAAGAACATCATAGCTTGTGAGGGGTCCAAAAGAAAAGAGAGGCATGAAAGGATTGACAAGTGGATCCAGAAACTTGACTTATCTGGCTTTGCAAACGTGCCTATAAGCTATCATGGTATGCTTCAGGCTAGAAGGTTCTTGCAGAACTATGGTTGTGATGGGTACAAGATGAAGGAGGATAATGGTCGCATAATGATATGCTGGCAGCAGCGATCCTTGTTTTCTGTCACAGCATGGAGACCAAGGAAGTAA 1437 0.4349 MESTMFQEEGSSSVTSSPLQFFSMMSLSPSLGSPSPIPCSKEMKYEERGLLLIHLLLAGANFVATGDLHNANLALEQISQHASPDGDSIQRIASYFTEALADRILKIWPGIHRALNFTRIPMVSDEILVQRLFFDLLPFLKLSYIMTNQAIFEAMGAEKMVHIIDLNATGPTQWVALLQVLSARPEGPPHLRITGVHHQKEVLDQMAHKLTEEAEKLDIPFQFNPVVSKLENLDFDKLRVKTGEALAISSILQLHTLLALDDDALQGRSPPLSKNSNAINLQKGLLNQNTLIDLLENSPSPDSASASASGSASSSPASSPALMNSESFLNALWGLFPKIMVVTEQDSNHNSLSMMERLPEALYSYSAFFDCLESTVTRASLDRIKLEKMLFGEEIKNIIACEGSKRKERHERIDKWIQKLDLSGFANVPISYHGMLQARRFLQNYGCDGYKMKEDNGRIMICWQQRSLFSVTAWRPRK 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g1794 478 ProSiteProfiles GRAS family profile. 43 475 IPR005202 -
Aed11g1794 478 PANTHER BNAA06G02820D PROTEIN 3 268 IPR030008 GO:0003700|GO:0005634|GO:0009739
Aed11g1794 478 PANTHER BNAA06G02820D PROTEIN 381 477 IPR030008 GO:0003700|GO:0005634|GO:0009739
Aed11g1794 478 PANTHER BNAA06G02820D PROTEIN 327 377 IPR030008 GO:0003700|GO:0005634|GO:0009739
Aed11g1794 478 MobiDBLite consensus disorder prediction 297 318 - -
Aed11g1794 478 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 381 477 IPR005202 -
Aed11g1794 478 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 327 377 IPR005202 -
Aed11g1794 478 Pfam GRAS domain family 52 475 IPR005202 -
Aed11g1794 478 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 3 268 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g1794 Aed-Chr11 21269326 21270762 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed11g1794 5 478 GRAS Transcription Factor Family AT1G50420 61.954 0.0 593
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Aed11g1794 GRAS 4.1e-130 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g1794 - - gmx:100775380 696.041