Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g1793 ATGAGTGCCATTTCCTCGACCCTCTCCGTCGTCACCGACGCAAATCTTCGCTCCAGATTTCATTCTAGTTTGATGCCATTCACTCTCACTCCCCCCACTCATTTCTCACTTTCTCAGCCCAAACGTATTTCTTCAATCAGATGCCAATCAATTAATACTGATAAGAAGAAATCAAGCAGAAATCTGCTGGACAATGCTAGTAATCTCCTTACGGACTTGTTAAGTGGTGGAAATACAGGGTCTATGCCCATAGCTGAAGGTGCTGTCTCTGATCTGTTTGGTCGACCTCTCTTTCTCTCACTATATGATTGGTTCTTGGAGCATGGCGGGGTGTATAAACTTGCCTTTGGACCAAAAGCATTTGTTGTTGTATCAGATCCCATAGTTGCTAGACATATTCTACGAGAAAATGCATTTTCTTATGACAAGGGAGTACTTGCTGATATCCTGGAACCAATAATGGGCAAAGGACTCATACCAGCAGACCTTGATACTTGGAAGCAAAGGAGAAGAGGTGTAGAAACTATATTTAATACTTATCTGTCATTTTCTACTGCTTTTATTTTCTTGACTCTGCCTGCATCTGATCCTTTGTTCAATTTACAAGTCTTTTTCCCCATTCATAATGTTTTGGGAGTAATTGCTCCGGGTTTCCATAACTCATACTTGGAAGCTATGGCCAAAATATTCACAGCTTGTTCAGAAAGGACGATATTGAAGATTAATAAGCTTCTTGAAGAAGGGGGTGATGATGGACCTAACTCAGTTGAATTGGATCTTGAGGCAGAGTTTTCTAATTTGGCTCTTGATATTATTGGGCTTGGTGTGTTCAACTATGACTTCGGTTCTGTCACCAAAGAATCTCCAGTTATTAAGGCTGTCTATGGCACTCTTTTTGAAGCTGAACATAGATCCACTTTCTACATTCCATATTGGAAAATTCCATTGGCAAGGTGGATAGTCCCGAGGCAAAGAAAGTTTCAGAATGACCTAAAGGTCATCAATACTTGTCTTGATGGACTTATCAGAAACGCAAAAGAGAGCAGACAGGAAACAGATGTTGAGAAATTGCAGCAGAGGGATTACTTAAGTTTGAAGGATGCAAGTCTTCTGCGTTTCCTGGTTGATATGCGGGGAGTTGATGTTGATGATCGTCAGTTGAGGGATGATTTAATGACAATGCTTATTGCTGGTCATGAAACAACGGCTGCAGTTCTTACTTGGGCAGTTTTCCTCCTAGCTCAAAATCCTAGCAAAATGAAGAAGGCTCAAGCAGAGGTAGATTCAGTTCAGGGTACAGGGAGGCCAACTTTTGAATCACTTAAAGAATTGCAGTACATTAGATTGATTGTTGTGGAGGCTCTTCGTTTATACCCCCAACCACCTTTGTTGATTAGACGTTCACTCAAATCTGATGTTTTACCAGGGGGGCACAAAGGTGATAAAGATGGTTATGCAATTCCTGCTGGGACTGATGTCTTCATTTCTGTATATAATCTCCATAGATCTCCATATTTTTGGGACCGGCCTAATGACTTCGAACCAGAGAGATTTCTAGTGCGAAACAATAATGAAGAAATTGAAGGATGGGCTGGTTTTGATCCATCTCGAAGTCCTGGAGCCTTGTATCCAAACGAGGTTATATCGGATTTTGCATTCTTGCCTTTTGGTGGCGGACCACGAAGATGTGTTGGGGACCAATTTGCTCTGATGGAGTCCACTGTAGCGTTGACTATGCTGCTCCAGAATTTTGACGTGGAACTGAAGGGGGGCCCTGAATCAGTGGAACTAGTTACTGGTGCAACTATTCATACCAAAAATGGAATGTGGTGCAAATTGAAGAAGAGATCTAATTCACATTGA 1863 0.4171 MSAISSTLSVVTDANLRSRFHSSLMPFTLTPPTHFSLSQPKRISSIRCQSINTDKKKSSRNLLDNASNLLTDLLSGGNTGSMPIAEGAVSDLFGRPLFLSLYDWFLEHGGVYKLAFGPKAFVVVSDPIVARHILRENAFSYDKGVLADILEPIMGKGLIPADLDTWKQRRRGVETIFNTYLSFSTAFIFLTLPASDPLFNLQVFFPIHNVLGVIAPGFHNSYLEAMAKIFTACSERTILKINKLLEEGGDDGPNSVELDLEAEFSNLALDIIGLGVFNYDFGSVTKESPVIKAVYGTLFEAEHRSTFYIPYWKIPLARWIVPRQRKFQNDLKVINTCLDGLIRNAKESRQETDVEKLQQRDYLSLKDASLLRFLVDMRGVDVDDRQLRDDLMTMLIAGHETTAAVLTWAVFLLAQNPSKMKKAQAEVDSVQGTGRPTFESLKELQYIRLIVVEALRLYPQPPLLIRRSLKSDVLPGGHKGDKDGYAIPAGTDVFISVYNLHRSPYFWDRPNDFEPERFLVRNNNEEIEGWAGFDPSRSPGALYPNEVISDFAFLPFGGGPRRCVGDQFALMESTVALTMLLQNFDVELKGGPESVELVTGATIHTKNGMWCKLKKRSNSH 620
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g1793 620 Gene3D Cytochrome P450 81 184 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed11g1793 620 Gene3D Cytochrome P450 202 620 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed11g1793 620 PANTHER CYTOCHROME P450 97B3, CHLOROPLASTIC 77 182 - -
Aed11g1793 620 SUPERFAMILY Cytochrome P450 93 178 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed11g1793 620 PANTHER CYTOCHROME P450 97B3, CHLOROPLASTIC 213 616 - -
Aed11g1793 620 PRINTS E-class P450 group I signature 563 586 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed11g1793 620 PRINTS E-class P450 group I signature 553 563 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed11g1793 620 PRINTS E-class P450 group I signature 406 432 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed11g1793 620 PRINTS E-class P450 group I signature 105 124 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed11g1793 620 PRINTS E-class P450 group I signature 386 403 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed11g1793 620 PRINTS P450 superfamily signature 449 460 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed11g1793 620 PRINTS P450 superfamily signature 563 574 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed11g1793 620 PRINTS P450 superfamily signature 554 563 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed11g1793 620 PRINTS P450 superfamily signature 397 414 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed11g1793 620 SUPERFAMILY Cytochrome P450 213 616 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed11g1793 620 PANTHER CYTOCHROME P450 FAMILY 4 77 182 - -
Aed11g1793 620 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 556 565 IPR017972 GO:0005506|GO:0016705
Aed11g1793 620 PANTHER CYTOCHROME P450 FAMILY 4 213 616 - -
Aed11g1793 620 Pfam Cytochrome P450 216 611 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aed11g1793 620 Pfam Cytochrome P450 105 173 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g1793 Aed-Chr11 21260618 21267633 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed11g1793 27 618 Cytochrome P450 AT4G15110 72.007 0.0 885
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g1793 K24543 - gmx:606504 1044.65