Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g1779 ATGCATTCCACCAACAAAATTAGTAATATCAAATCTAAAGACATCGAACGATGCTACGATAACTACCGAAAGAAGCGAAAGCGTCCTTGCGAACTCGCCTCACACGGTTTCATATCGGTCATTGGGAGGCGGCGCGTGATGGAAGACGCGGTAAAGGTGGTTCCCGGTCTGATGGCGGCGGAGAAGCGTTTTGGCGGTTATGATTTCTTCGCTGTTTACGACGGACACGGAGGGACGCTGGTGGCGAACGCTTGCCGCGACAGGCTGCACTTGTTGTTGGCGGAGGAAGTGAGGGAGCTGAGCGAAGAGAAAGGGTTGGATTGGTGCCAAGTCATGGGCTCGTGTTTCATGAAGATGGATAACGAAGTTGATGATGATGAGGACCAGGACTATGGCACCGAGAACACCATGGGTTCCACCGCGGCGGTGGTGGTTATCGGGAAGGAGGAGATTGTGGTGGCGAATTGCGGAGACTCCAGGGCGGTGTTGTGCCGTGGCGGTGTAGCTGTGCCACTTTCACGTGACCATAAGGCTGATCGTCCAGATGAAGAAGCAACAGGTGGGAGAGTGATTAATTGGAACGGAAATCGTGTCTTTGGAGTACTTGCTACTTCAAGATCCATAGGGGATTACTGCATGAAGCCTTATGTCATATCTCAACCGGAGACGAATGTGTACGCGCGAACAGAATCAGATGAGTTTCTAGTGGTTGCGAGTGACGGCCTATGGGATGTAGTGTCCAACAACTTTGTTTGTGAGGTTGTACGAGGTTGCCTACATGGGAAAATTAGGAGGCATTTTAAACTAAAAGAACAAGACTCATCAACCGAAGCCGCAGCGTTGTTGGCCGAGTTGGCTATGGCTCGTGGAAGCAAAGACAATATCAGTGTCATAGTCATCCAACTCAACACTACAACCTGA 921 0.5049 MHSTNKISNIKSKDIERCYDNYRKKRKRPCELASHGFISVIGRRRVMEDAVKVVPGLMAAEKRFGGYDFFAVYDGHGGTLVANACRDRLHLLLAEEVRELSEEKGLDWCQVMGSCFMKMDNEVDDDEDQDYGTENTMGSTAAVVVIGKEEIVVANCGDSRAVLCRGGVAVPLSRDHKADRPDEEATGGRVINWNGNRVFGVLATSRSIGDYCMKPYVISQPETNVYARTESDEFLVVASDGLWDVVSNNFVCEVVRGCLHGKIRRHFKLKEQDSSTEAAALLAELAMARGSKDNISVIVIQLNTTT 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g1779 306 ProSitePatterns PPM-type phosphatase domain signature. 69 77 IPR000222 GO:0043169
Aed11g1779 306 SMART PP2C_SIG_2 49 302 IPR001932 -
Aed11g1779 306 CDD PP2Cc 34 302 IPR001932 -
Aed11g1779 306 PANTHER PHOSPHATASE 2C FAMILY PROTEIN 15 304 - -
Aed11g1779 306 SMART PP2C_4 24 300 IPR001932 -
Aed11g1779 306 Pfam Protein phosphatase 2C 35 295 IPR001932 -
Aed11g1779 306 PANTHER ALPHABET, ISOFORM E-RELATED 15 304 - -
Aed11g1779 306 Gene3D - 30 305 IPR036457 -
Aed11g1779 306 ProSiteProfiles PPM-type phosphatase domain profile. 34 302 IPR001932 -
Aed11g1779 306 SUPERFAMILY PP2C-like 34 303 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g1779 Aed-Chr11 21178563 21179676 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed11g1779 35 302 PP2C-type Phosphatase Gene Family AT2G29380 49.123 9.25e-77 237
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g1779 K14497 - gmx:100813248 457.603
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g1779 11 21178563 21179676 Aed11g1779 11 21178563 21179676 ECH