Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g1778 ATGGAGTTTATGCGAGACACAAAGTCACAGCTTGAACTCCAAGAGGGCAGTAGTAATAGAAATATTGGGTCCTCTCTGTCAAAGCTGATATTAACAAGTGGCACAAACACCCTGGACTCAATTTTCTCGAATTGCCTCCCAACAAATGGAACCACTGCTAGCAAGTCTGTGTTAGATTATTTAGAACCTTCGGGGTTTGAGGCTTTGGGCTCTTCGGTGTACCTCCGCCAAAGAGACATCCTCCAAAAGTTCTACCAAGAAAGCCAAGGAAATGGGAACGGGAACTGTTATGTTCCCAGCAGTTCCTTGGCGTCGACGAACTCAGGTGGGAAGAAAAAGCTGTACAGGGGAGTGAGGCAGAGGCACTGGGGAAAATGGGTGGCGGAAATAAGACTCCCCCAGAACAGGATGAGAGTATGGTTGGGTACCTACGACACCGCCGAAGCTGCTGCTTACGCCTACGACCGCGCCGCCTATAAGCTCCGTGGTGAGTACGCGCGTTTGAATTTCCCCAATCTCAAGGACCCCACCAAGCTCGGTTTCGGAGACTCCGCCAGAATGAACGCTCTCAAGACCTCCGTCGATGCCAAAATTCAAGCCATATGTCAGAAGGTAAAAAGGGAGAGAGCCAAAAAGAATGCGGCAAAGAAGCTGAAAGCTTCAGCCAGCGCTGGCGCTGACCCTAAGACTAACACTCACAATACCAACGAGCTGTTCAATTGGACCAACGAGCTGTTTTCGCCCACCGTTTCAGAGGATGGGGTTTGGAAGGGGGAGAACTCGCCGGCCTCGGTTTCCACGGATACGGAAACAGAGTTGTTCGAAGGTTGTTCTCTCGCTAGACTGCCTTCCTTCGATCCCGAGTTGATCTGGGAGGTTCTGGCTGTTTAA 891 0.5084 MEFMRDTKSQLELQEGSSNRNIGSSLSKLILTSGTNTLDSIFSNCLPTNGTTASKSVLDYLEPSGFEALGSSVYLRQRDILQKFYQESQGNGNGNCYVPSSSLASTNSGGKKKLYRGVRQRHWGKWVAEIRLPQNRMRVWLGTYDTAEAAAYAYDRAAYKLRGEYARLNFPNLKDPTKLGFGDSARMNALKTSVDAKIQAICQKVKRERAKKNAAKKLKASASAGADPKTNTHNTNELFNWTNELFSPTVSEDGVWKGENSPASVSTDTETELFEGCSLARLPSFDPELIWEVLAV 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g1778 296 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 21 217 - -
Aed11g1778 296 Gene3D AP2/ERF domain 114 172 IPR036955 GO:0003700|GO:0006355
Aed11g1778 296 CDD AP2 113 173 IPR001471 GO:0003700|GO:0006355
Aed11g1778 296 Pfam AP2 domain 115 164 IPR001471 GO:0003700|GO:0006355
Aed11g1778 296 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF061 270 295 - -
Aed11g1778 296 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF061 21 217 - -
Aed11g1778 296 ProSiteProfiles AP2/ERF domain profile. 114 171 IPR001471 GO:0003700|GO:0006355
Aed11g1778 296 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 270 295 - -
Aed11g1778 296 SMART rav1_2 114 177 IPR001471 GO:0003700|GO:0006355
Aed11g1778 296 SUPERFAMILY DNA-binding domain 114 171 IPR016177 GO:0003677
Aed11g1778 296 PRINTS Ethylene responsive element binding protein signature 137 153 IPR001471 GO:0003700|GO:0006355
Aed11g1778 296 PRINTS Ethylene responsive element binding protein signature 115 126 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g1778 Aed-Chr11 21166572 21167462 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed11g1778 22 295 AP2-EREBP Transcription Factor Family AT1G64380 47.516 7.16e-69 215
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Aed11g1778 AP2 5.9e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g1778 - - gmx:100785364 396.741
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g1778 11 21166572 21167462 Aed11g1778 11 21166572 21167462 ECH