Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g1775 ATGGAAAGTGACGTGGGGAGTTGGGAGCAGAACGCAGTGATGAGTGAGCTAGTTGAGGGTTTGGAGATAGCAAGAAACTTGAAGCAAGAATTATTGATGCTGACTTCACCCTCTTCGGTTAGAGTTGACTCACTACTGCAGAGGATATTATCTTCTTACGACAAGGCTTTACTTCTTCTTAGATGGAATGAATCAGTACCCATGCAACAACCACACTCCAAAGCTGCTTCTGCCCCCATAAAACACAATTCAAACAAGAGAAAGATGATGCCAAAATGGACGGAACAGATTAGAGTGAAGATAGAGAATGGCGTTGAAGGAAGCCCCCACGAAGATGGTTACAGCTGGAGAAAATATGGACAGAAAGACATCCTTAGTGCAAAATATCCCAGAAGCTATTATAGGTGCACCTTCCGCAAAACTAAGGGGTGCGTGGCAACGAAGCAAGTGCAGAGATCAGAAGAAGACCTCACTGGAACTATCTTTGAGATCACTTACCGAGGAACCCACACATGTAACAGTAAGGGAAACGATGCCGTTCCGCCGCCACAACTACAAGACAAAACTGATCACCACGGCCACGCCTTAGAGAATGATCCCTTTTCCCAAACATCCTTCTTTTCTGAACCAAATTATTTTGGGTCTCCGTCTTTCCATGCCGCCGGGATCGCATCAACCACTAATTCTCCAATTTTCGATTTTAATTTCTCACTCGATGCTGTGGGAATTGATGCAAATTTCCCCTTCAATGCTTCGGCCTTTTAA 765 0.4471 MESDVGSWEQNAVMSELVEGLEIARNLKQELLMLTSPSSVRVDSLLQRILSSYDKALLLLRWNESVPMQQPHSKAASAPIKHNSNKRKMMPKWTEQIRVKIENGVEGSPHEDGYSWRKYGQKDILSAKYPRSYYRCTFRKTKGCVATKQVQRSEEDLTGTIFEITYRGTHTCNSKGNDAVPPPQLQDKTDHHGHALENDPFSQTSFFSEPNYFGSPSFHAAGIASTTNSPIFDFNFSLDAVGIDANFPFNASAF 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g1775 254 Pfam WRKY DNA -binding domain 111 173 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aed11g1775 254 Gene3D WRKY domain 95 174 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aed11g1775 254 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 1 193 IPR044810 GO:0003700
Aed11g1775 254 MobiDBLite consensus disorder prediction 173 195 - -
Aed11g1775 254 ProSiteProfiles WRKY domain profile. 105 173 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aed11g1775 254 PANTHER WRKY TRANSCRIPTION FACTOR 41-RELATED 1 193 - -
Aed11g1775 254 SMART WRKY_cls 110 174 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aed11g1775 254 SUPERFAMILY WRKY DNA-binding domain 106 174 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g1775 Aed-Chr11 21155026 21156374 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed11g1775 4 248 WRKY Transcription Factor Family AT4G11070 37.011 1.13e-47 157
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Aed11g1775 WRKY 2.6e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g1775 - - gmx:100127370 289.656
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g1775 11 21155026 21156374 Aed11g1775 11 21155026 21156374 ECH
Aed2g0566 2 4104319 4107114 Aed11g1775 11 21155026 21156374 ECH
Aed11g1775 11 21155026 21156374 Aed2g0566 2 4104319 4107114 ECH