Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Aed11g1763 | ATGACTGCGCCACCGACGACCAAGTACACTACTCGCCACACCAAACTACTCATACCCGACCCCCAACAACACCCACATCCCAAACTCGTCAGAGTAACCGTCACAGACACCGACGCCACCGACTCCTCCAGCGACGATGAACAAAACCGACAACGACACAGAAAGTTCGTCCACGAGATTTCTATTGAGTCGTGCGCCACCGGCGTCGTTTCGAGGAAGAGAATTCGAAACAGGGCCACCGCCAGAGCTCCAGACACAAGGCGCGTGTCCAACGGCAGGAAATTCCGCGGAGTGAGACAGAGGCCGTGGGGAAAATGGGCCGCGGAAATACGAGACCCGTCACGGCGCGTTCGGTTATGGTTGGGTACCTACGACACTGCAGAGGAAGCTGCTTTGGTGTACGACAACGCGGCCATTAAGCTTCGTGGACCCCACGCGCTCACCAATTTCATAACTCCACCGCTCGGAGAAGATACTCAAAACAAGAACCTCTTTTCTCCCACTTCCGTCCTTCACTGCTGTTCCTTGTCCGAGGAAGCTGACTCCGTAACGGCCAAAGAAGATGACTACTCCTCCGTCAAACCAGACTCACCGTTTCCGATTCCGAGCGACATACAATTTGATTTCCGAGGTTGTTCGCCGACGCCGGCGCCGGAGAGCGTCTTGTTCAGCGACGTCGACGATGATTGGTCCGGTGTGTTTCTTAATGCTTGTGAGGATTTCGGTTTCAAAAGTTGGCATACGGACACAAATCGTGACTTTTTCCAAGATATCGACGATTTGTTTCCCTCGGATCCCCTCCTTGCTCTTTGA | 813 | 0.5387 | MTAPPTTKYTTRHTKLLIPDPQQHPHPKLVRVTVTDTDATDSSSDDEQNRQRHRKFVHEISIESCATGVVSRKRIRNRATARAPDTRRVSNGRKFRGVRQRPWGKWAAEIRDPSRRVRLWLGTYDTAEEAALVYDNAAIKLRGPHALTNFITPPLGEDTQNKNLFSPTSVLHCCSLSEEADSVTAKEDDYSSVKPDSPFPIPSDIQFDFRGCSPTPAPESVLFSDVDDDWSGVFLNACEDFGFKSWHTDTNRDFFQDIDDLFPSDPLLAL | 270 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Aed11g1763 | 270 | ProSiteProfiles | AP2/ERF domain profile. | 94 | 151 | IPR001471 | GO:0003700|GO:0006355 | |
Aed11g1763 | 270 | PANTHER | ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR CRF2 | 8 | 266 | - | - | |
Aed11g1763 | 270 | SMART | rav1_2 | 94 | 157 | IPR001471 | GO:0003700|GO:0006355 | |
Aed11g1763 | 270 | PRINTS | Ethylene responsive element binding protein signature | 117 | 133 | IPR001471 | GO:0003700|GO:0006355 | |
Aed11g1763 | 270 | PRINTS | Ethylene responsive element binding protein signature | 95 | 106 | IPR001471 | GO:0003700|GO:0006355 | |
Aed11g1763 | 270 | SUPERFAMILY | DNA-binding domain | 94 | 150 | IPR016177 | GO:0003677 | |
Aed11g1763 | 270 | Pfam | AP2 domain | 94 | 143 | IPR001471 | GO:0003700|GO:0006355 | |
Aed11g1763 | 270 | Gene3D | AP2/ERF domain | 93 | 152 | IPR036955 | GO:0003700|GO:0006355 | |
Aed11g1763 | 270 | CDD | AP2 | 94 | 150 | IPR001471 | GO:0003700|GO:0006355 | |
Aed11g1763 | 270 | PANTHER | SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR | 8 | 266 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Aed11g1763 | Aed-Chr11 | 21091813 | 21092625 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Aed11g1763 | 27 | 270 | AP2-EREBP Transcription Factor Family | AT4G11140 | 39.456 | 4.24e-47 | 157 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | AP2 or ERF-ERF | Aed11g1763 | AP2 | 2.1e-14 | CL0081 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Aed11g1763 | - | - | gmx:100779905 | 381.333 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Aed11g1763 | 11 | 21091813 | 21092625 | Aed5g2342 | 5 | 25060011 | 25060979 | PCT |