Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed11g1763 ATGACTGCGCCACCGACGACCAAGTACACTACTCGCCACACCAAACTACTCATACCCGACCCCCAACAACACCCACATCCCAAACTCGTCAGAGTAACCGTCACAGACACCGACGCCACCGACTCCTCCAGCGACGATGAACAAAACCGACAACGACACAGAAAGTTCGTCCACGAGATTTCTATTGAGTCGTGCGCCACCGGCGTCGTTTCGAGGAAGAGAATTCGAAACAGGGCCACCGCCAGAGCTCCAGACACAAGGCGCGTGTCCAACGGCAGGAAATTCCGCGGAGTGAGACAGAGGCCGTGGGGAAAATGGGCCGCGGAAATACGAGACCCGTCACGGCGCGTTCGGTTATGGTTGGGTACCTACGACACTGCAGAGGAAGCTGCTTTGGTGTACGACAACGCGGCCATTAAGCTTCGTGGACCCCACGCGCTCACCAATTTCATAACTCCACCGCTCGGAGAAGATACTCAAAACAAGAACCTCTTTTCTCCCACTTCCGTCCTTCACTGCTGTTCCTTGTCCGAGGAAGCTGACTCCGTAACGGCCAAAGAAGATGACTACTCCTCCGTCAAACCAGACTCACCGTTTCCGATTCCGAGCGACATACAATTTGATTTCCGAGGTTGTTCGCCGACGCCGGCGCCGGAGAGCGTCTTGTTCAGCGACGTCGACGATGATTGGTCCGGTGTGTTTCTTAATGCTTGTGAGGATTTCGGTTTCAAAAGTTGGCATACGGACACAAATCGTGACTTTTTCCAAGATATCGACGATTTGTTTCCCTCGGATCCCCTCCTTGCTCTTTGA 813 0.5387 MTAPPTTKYTTRHTKLLIPDPQQHPHPKLVRVTVTDTDATDSSSDDEQNRQRHRKFVHEISIESCATGVVSRKRIRNRATARAPDTRRVSNGRKFRGVRQRPWGKWAAEIRDPSRRVRLWLGTYDTAEEAALVYDNAAIKLRGPHALTNFITPPLGEDTQNKNLFSPTSVLHCCSLSEEADSVTAKEDDYSSVKPDSPFPIPSDIQFDFRGCSPTPAPESVLFSDVDDDWSGVFLNACEDFGFKSWHTDTNRDFFQDIDDLFPSDPLLAL 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed11g1763 270 ProSiteProfiles AP2/ERF domain profile. 94 151 IPR001471 GO:0003700|GO:0006355
Aed11g1763 270 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR CRF2 8 266 - -
Aed11g1763 270 SMART rav1_2 94 157 IPR001471 GO:0003700|GO:0006355
Aed11g1763 270 PRINTS Ethylene responsive element binding protein signature 117 133 IPR001471 GO:0003700|GO:0006355
Aed11g1763 270 PRINTS Ethylene responsive element binding protein signature 95 106 IPR001471 GO:0003700|GO:0006355
Aed11g1763 270 SUPERFAMILY DNA-binding domain 94 150 IPR016177 GO:0003677
Aed11g1763 270 Pfam AP2 domain 94 143 IPR001471 GO:0003700|GO:0006355
Aed11g1763 270 Gene3D AP2/ERF domain 93 152 IPR036955 GO:0003700|GO:0006355
Aed11g1763 270 CDD AP2 94 150 IPR001471 GO:0003700|GO:0006355
Aed11g1763 270 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 8 266 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed11g1763 Aed-Chr11 21091813 21092625 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed11g1763 27 270 AP2-EREBP Transcription Factor Family AT4G11140 39.456 4.24e-47 157
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Aed11g1763 AP2 2.1e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed11g1763 - - gmx:100779905 381.333
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed11g1763 11 21091813 21092625 Aed5g2342 5 25060011 25060979 PCT